Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MIR143-201ENST00000385300 106 ntBASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 NUDT19P3-201ENST00000404698 555 ntBASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AC015864.1-201ENST00000496512 544 ntBASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AL136038.1-201ENST00000497246 351 ntBASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 RNA5SP362-201ENST00000516048 118 ntBASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AL358913.1-201ENST00000554342 121 ntBASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AL390334.1-201ENST00000556395 450 ntBASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AC079395.2-201ENST00000610982 737 ntBASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 AC114947.2-201ENST00000565748 2125 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 MIR323A-201ENST00000362199 86 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 RNA5SP242-201ENST00000364171 118 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 RNA5SP132-201ENST00000364725 118 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 U3.32-201ENST00000408116 212 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 SNORA79B-201ENST00000410557 148 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 AC104333.2-201ENST00000422630 192 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 EI24P4-201ENST00000423683 1078 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 AC108075.1-201ENST00000424692 529 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 RPS4XP16-201ENST00000427198 791 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 COX6CP13-201ENST00000428703 226 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 ARAFP2-201ENST00000440565 559 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 SPRYD7P1-201ENST00000443861 570 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 MTND6P5-201ENST00000448266 512 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 AC005412.2-201ENST00000492004 341 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 UGT2A3P7-201ENST00000510485 734 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 AC109309.2-201ENST00000612597 332 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 AL359513.1-201ENST00000614364 557 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 AC090527.3-201ENST00000619041 548 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 AC026124.2-201ENST00000621847 656 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 KARSP1-201ENST00000451871 1752 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 SMG1P4-204ENST00000523028 4131 ntBASIC5.29□□□□□ -1.56
CDKL3Q8IVW4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 AC063976.2-201ENST00000425667 3556 ntBASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms