Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC007346.2-201ENST00000564816 892 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC079148.1-201ENST00000565944 819 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC233266.2-201ENST00000567067 528 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AP001267.4-201ENST00000602598 545 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC016542.1-201ENST00000608259 493 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC019131.2-201ENST00000609071 870 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC009120.7-201ENST00000623452 780 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC097372.4-201ENST00000625025 466 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC022164.1-201ENST00000568767 2673 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC132825.1-201ENST00000463573 2247 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AC107021.2-201ENST00000567714 2095 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 RN7SKP6-201ENST00000364795 319 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 SNORA67-201ENST00000384423 137 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 MTCYBP29-201ENST00000436327 1006 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AL161722.1-201ENST00000446972 1032 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 DNAJB5P1-201ENST00000454004 806 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 SNRPCP3-201ENST00000474888 476 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 MTCO1P31-201ENST00000506355 492 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AC105384.2-201ENST00000508433 640 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AC106806.2-201ENST00000509365 500 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AC021146.7-201ENST00000509604 775 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AC093510.2-201ENST00000562820 896 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AC011840.5-201ENST00000582125 771 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AC242628.1-201ENST00000606810 391 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AL645927.2-201ENST00000618350 349 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AL445493.3-201ENST00000619568 477 ntBASIC6.05□□□□□ -1.44
HERC6Q8IVU3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
HERC6Q8IVU3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AC140134.1-201ENST00000511830 3544 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AL034546.1-201ENST00000623740 3693 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 Z95114.1-201ENST00000624264 14574 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 SNORD1C-201ENST00000363315 78 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 RNU6-1263P-201ENST00000384601 106 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 MIR551A-201ENST00000385042 96 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 MIR130A-201ENST00000385274 89 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 Z86062.1-201ENST00000406773 777 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AC105399.1-202ENST00000447303 205 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 RPS29P22-201ENST00000472363 168 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 RPL7P6-201ENST00000480903 738 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 LARP7P4-201ENST00000481075 878 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AC007686.1-201ENST00000488511 463 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AC090058.1-201ENST00000498788 435 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms