Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 RPL34P26-201ENST00000445636 354 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 RPL6P5-201ENST00000445678 828 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 CYCSP42-201ENST00000450823 238 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 RPS20P4-201ENST00000461659 355 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC008379.1-201ENST00000463655 464 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 AL157777.1-201ENST00000468100 304 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 CYCSP20-201ENST00000473154 315 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 RPEP1-201ENST00000504507 658 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 RNA5SP340-201ENST00000517132 107 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 BUD31P1-201ENST00000521828 359 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC018442.3-201ENST00000523025 183 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 AL845552.1-201ENST00000556820 323 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 AL109741.3-201ENST00000561748 592 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 MIR4271-201ENST00000582451 67 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 EIF1P5-201ENST00000585002 234 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC145423.1-201ENST00000605712 336 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 MIR6809-201ENST00000612189 116 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC004477.3-201ENST00000614061 590 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC016957.2-201ENST00000616998 848 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC022306.3-201ENST00000619930 550 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 AL359742.1-201ENST00000622497 540 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC073592.6-201ENST00000624271 415 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC38Q502W7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC38Q502W7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC38Q502W7 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 SNORA70.6-201ENST00000383934 134 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 MIR320B1-201ENST00000390209 79 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 SNORA11.3-201ENST00000408471 128 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 UBE2V1P11-201ENST00000411559 285 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC069282.1-201ENST00000411911 526 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 BX664727.1-201ENST00000416024 466 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC023141.8-201ENST00000442554 208 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 RNF2P1-201ENST00000442955 1010 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC005077.1-201ENST00000449226 375 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 HMGB1P26-201ENST00000452520 628 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC105384.2-201ENST00000508433 640 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 RNA5SP473-201ENST00000516402 125 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 EIF4A2P5-201ENST00000529914 499 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC124283.4-201ENST00000581815 456 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 AP005262.1-201ENST00000582646 997 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC008507.3-201ENST00000585753 472 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC005156.1-201ENST00000613371 573 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 AL359513.1-201ENST00000614364 557 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 SNORA11.6-201ENST00000619030 128 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 AC024023.1-201ENST00000624530 922 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms