Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN20P56880 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN20P56880 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN20P56880 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN20P56880 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CLDN20P56880 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN20P56880 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN20P56880 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN20P56880 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN20P56880 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN20P56880 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN20P56880 RNA5SP30-201ENST00000365552 115 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 MIR620-201ENST00000385232 95 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 AL035405.1-201ENST00000400795 710 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN20P56880 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN20P56880 BMS1P17-202ENST00000416720 316 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 BTF3P9-201ENST00000418784 283 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 ARL2BPP3-201ENST00000421226 480 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 REREP1Y-201ENST00000422655 198 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 CHEK2P5-201ENST00000423877 246 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 VN1R21P-201ENST00000426703 765 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN20P56880 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN20P56880 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN20P56880 REREP2Y-201ENST00000439103 200 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 RNF2P1-201ENST00000442955 1010 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN20P56880 RPS27AP2-201ENST00000457576 465 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 AC023141.9-201ENST00000458734 412 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN20P56880 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN20P56880 AC074087.1-201ENST00000512059 724 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.11□□□□□ -1.59
CLDN20P56880 MTATP6P9-201ENST00000515039 680 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 GAPDHP62-201ENST00000515313 990 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 FTH1P11-201ENST00000517577 551 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN20P56880 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.11□□□□□ -1.59
CLDN20P56880 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN20P56880 AC093014.1-201ENST00000548926 724 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN20P56880 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN20P56880 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN20P56880 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN20P56880 AC004477.3-201ENST00000614061 590 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN20P56880 AL035661.1-201ENST00000620459 1144 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN20P56880 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLDN20P56880 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN20P56880 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN20P56880 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN20P56880 AC114786.1-201ENST00000512892 1415 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN20P56880 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.11□□□□□ -1.59
CLDN20P56880 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CLDN20P56880 YES1P1-201ENST00000418510 1628 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 AC245100.2-201ENST00000454544 1679 ntBASIC5.11□□□□□ -1.59
CLDN20P56880 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN20P56880 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLDN20P56880 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
CLDN20P56880 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN20P56880 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CLDN20P56880 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CLDN20P56880 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN20P56880 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN20P56880 AL022311.1-201ENST00000623726 19416 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN20P56880 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN20P56880 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN20P56880 MIR323A-201ENST00000362199 86 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 RNA5SP131-201ENST00000365452 119 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CLDN20P56880 ATP5F1P6-201ENST00000402768 767 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN20P56880 AL596448.1-201ENST00000415024 392 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN20P56880 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.1□□□□□ -1.59
CLDN20P56880 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN20P56880 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.1□□□□□ -1.59
CLDN20P56880 AC113412.1-201ENST00000425840 504 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 PTP4A1P3-201ENST00000433661 420 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 FMO7P-201ENST00000436045 768 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN20P56880 TCEA1P3-201ENST00000443005 880 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN20P56880 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN20P56880 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN20P56880 MEMO1P4-201ENST00000453590 386 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CLDN20P56880 AC132825.1-201ENST00000463573 2247 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 NPM1P17-201ENST00000479221 602 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.1□□□□□ -1.59
CLDN20P56880 AC034244.2-201ENST00000514668 858 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.1□□□□□ -1.59
CLDN20P56880 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN20P56880 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms