Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC111000.6-201ENST00000514471 709 ntBASIC5.26□□□□□ -1.57
PDX1P52945 SNORA26.10-201ENST00000516427 141 ntBASIC5.26□□□□□ -1.57
PDX1P52945 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.26□□□□□ -1.57
PDX1P52945 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.26□□□□□ -1.57
PDX1P52945 NMNAT1P5-201ENST00000559657 841 ntBASIC5.26□□□□□ -1.57
PDX1P52945 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.26□□□□□ -1.57
PDX1P52945 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.26□□□□□ -1.57
PDX1P52945 AC069307.1-201ENST00000602820 447 ntBASIC5.26□□□□□ -1.57
PDX1P52945 AC092474.3-201ENST00000603022 568 ntBASIC5.26□□□□□ -1.57
PDX1P52945 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.26□□□□□ -1.57
PDX1P52945 OR51C1P-201ENST00000608504 942 ntBASIC5.26□□□□□ -1.57
PDX1P52945 AC090527.3-201ENST00000619041 548 ntBASIC5.26□□□□□ -1.57
PDX1P52945 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.26□□□□□ -1.57
PDX1P52945 AC119674.1-220ENST00000641502 1048 ntBASIC5.26□□□□□ -1.57
PDX1P52945 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
PDX1P52945 LINC01739-205ENST00000641890 573 ntBASIC5.26□□□□□ -1.57
PDX1P52945 AC068870.1-201ENST00000563737 2455 ntBASIC5.26□□□□□ -1.57
PDX1P52945 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDX1P52945 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDX1P52945 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
PDX1P52945 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.26□□□□□ -1.57
PDX1P52945 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
PDX1P52945 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDX1P52945 MTND4P21-201ENST00000453886 1357 ntBASIC5.26□□□□□ -1.57
PDX1P52945 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.26□□□□□ -1.57
PDX1P52945 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDX1P52945 AL034546.1-201ENST00000623740 3693 ntBASIC5.26□□□□□ -1.57
PDX1P52945 AC131971.1-201ENST00000332881 1482 ntBASIC5.26□□□□□ -1.57
PDX1P52945 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.26□□□□□ -1.57
PDX1P52945 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.26□□□□□ -1.57
PDX1P52945 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PDX1P52945 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PDX1P52945 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PDX1P52945 ZNF733P-202ENST00000444809 1573 ntBASIC5.25□□□□□ -1.57
PDX1P52945 AC009962.1-201ENST00000567327 3813 ntBASIC5.25□□□□□ -1.57
PDX1P52945 HSPD1P7-201ENST00000447985 1686 ntBASIC5.25□□□□□ -1.57
PDX1P52945 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.25□□□□□ -1.57
PDX1P52945 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.25□□□□□ -1.57
PDX1P52945 MUC2-202ENST00000613187 4845 ntBASIC5.25□□□□□ -1.57
PDX1P52945 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDX1P52945 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
PDX1P52945 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PDX1P52945 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PDX1P52945 RNA5SP305-201ENST00000362665 119 ntBASIC5.25□□□□□ -1.57
PDX1P52945 RNU1-43P-201ENST00000365052 165 ntBASIC5.25□□□□□ -1.57
PDX1P52945 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PDX1P52945 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.25□□□□□ -1.57
PDX1P52945 RNU1-149P-201ENST00000390870 161 ntBASIC5.25□□□□□ -1.57
PDX1P52945 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.25□□□□□ -1.57
PDX1P52945 TRIM60P17-201ENST00000415181 719 ntBASIC5.25□□□□□ -1.57
PDX1P52945 NIPA2P1-201ENST00000426223 976 ntBASIC5.25□□□□□ -1.57
PDX1P52945 NPM1P26-201ENST00000426339 738 ntBASIC5.25□□□□□ -1.57
PDX1P52945 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.25□□□□□ -1.57
PDX1P52945 TMEM183AP1-205ENST00000432739 290 ntBASIC5.25□□□□□ -1.57
PDX1P52945 MRPS33P4-201ENST00000434892 317 ntBASIC5.25□□□□□ -1.57
PDX1P52945 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.25□□□□□ -1.57
PDX1P52945 CEACAMP7-201ENST00000444105 496 ntBASIC5.25□□□□□ -1.57
PDX1P52945 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.25□□□□□ -1.57
PDX1P52945 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.25□□□□□ -1.57
PDX1P52945 AC073850.1-201ENST00000449243 255 ntBASIC5.25□□□□□ -1.57
PDX1P52945 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.25□□□□□ -1.57
PDX1P52945 AC015864.1-201ENST00000496512 544 ntBASIC5.25□□□□□ -1.57
PDX1P52945 RPS26P24-201ENST00000497656 331 ntBASIC5.25□□□□□ -1.57
PDX1P52945 RPS17P5-201ENST00000498293 408 ntBASIC5.25□□□□□ -1.57
PDX1P52945 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.25□□□□□ -1.57
PDX1P52945 SNRPCP2-201ENST00000504370 475 ntBASIC5.25□□□□□ -1.57
PDX1P52945 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.25□□□□□ -1.57
PDX1P52945 GLUD1P3-202ENST00000508551 200 ntBASIC5.25□□□□□ -1.57
PDX1P52945 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.25□□□□□ -1.57
PDX1P52945 RNU6-760P-201ENST00000516078 97 ntBASIC5.25□□□□□ -1.57
PDX1P52945 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.25□□□□□ -1.57
PDX1P52945 HMGB1P40-201ENST00000525121 540 ntBASIC5.25□□□□□ -1.57
PDX1P52945 AP000676.2-201ENST00000529711 301 ntBASIC5.25□□□□□ -1.57
PDX1P52945 AC127381.1-201ENST00000555979 939 ntBASIC5.25□□□□□ -1.57
PDX1P52945 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
PDX1P52945 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDX1P52945 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.25□□□□□ -1.57
PDX1P52945 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.25□□□□□ -1.57
PDX1P52945 AP000720.1-201ENST00000625091 483 ntBASIC5.25□□□□□ -1.57
PDX1P52945 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.25□□□□□ -1.57
PDX1P52945 CYP4F35P-202ENST00000636121 390 ntBASIC5.25□□□□□ -1.57
PDX1P52945 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
PDX1P52945 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDX1P52945 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PDX1P52945 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PDX1P52945 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
PDX1P52945 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDX1P52945 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
PDX1P52945 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDX1P52945 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
PDX1P52945 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
PDX1P52945 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.24□□□□□ -1.57
PDX1P52945 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDX1P52945 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDX1P52945 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDX1P52945 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDX1P52945 OR55B1P-203ENST00000641518 2602 ntBASIC5.24□□□□□ -1.57
PDX1P52945 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDX1P52945 RNA5SP453-201ENST00000362503 119 ntBASIC5.24□□□□□ -1.57
PDX1P52945 RN7SKP185-201ENST00000362813 326 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms