Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RNU6-362P-201ENST00000516736 90 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.37□□□□□ -1.55
HNF4AP41235 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.37□□□□□ -1.55
HNF4AP41235 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 AL359219.2-201ENST00000555184 348 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 MIR3614-201ENST00000581261 86 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 RN7SL787P-201ENST00000613000 284 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 AC008115.3-201ENST00000614874 549 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 AC025574.2-201ENST00000615621 514 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 SNORA11.6-201ENST00000619030 128 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 AC119674.1-220ENST00000641502 1048 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HNF4AP41235 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HNF4AP41235 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.37□□□□□ -1.55
HNF4AP41235 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HNF4AP41235 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HNF4AP41235 AC092079.1-201ENST00000558620 1985 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HNF4AP41235 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HNF4AP41235 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
HNF4AP41235 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HNF4AP41235 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HNF4AP41235 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HNF4AP41235 RN7SKP145-201ENST00000363291 303 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 RN7SKP15-201ENST00000364742 309 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HNF4AP41235 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HNF4AP41235 MIR551A-201ENST00000385042 96 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 AL358178.1-201ENST00000407698 397 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 AL133482.1-201ENST00000415988 498 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.36□□□□□ -1.55
HNF4AP41235 RPL34P3-201ENST00000421454 338 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 AL356806.1-201ENST00000422524 916 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HNF4AP41235 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.36□□□□□ -1.55
HNF4AP41235 AL136231.1-201ENST00000429407 730 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 AL161636.2-201ENST00000445179 927 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 AL450996.1-201ENST00000445574 1202 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.36□□□□□ -1.55
HNF4AP41235 HMGN1P36-201ENST00000446623 298 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HNF4AP41235 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.36□□□□□ -1.55
HNF4AP41235 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.36□□□□□ -1.55
HNF4AP41235 ACTR6P1-201ENST00000514311 1104 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.36□□□□□ -1.55
HNF4AP41235 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.36□□□□□ -1.55
HNF4AP41235 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HNF4AP41235 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HNF4AP41235 AC125612.1-201ENST00000547580 377 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.36□□□□□ -1.55
HNF4AP41235 AC074029.2-201ENST00000551045 634 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.36□□□□□ -1.55
HNF4AP41235 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.36□□□□□ -1.55
HNF4AP41235 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.36□□□□□ -1.55
HNF4AP41235 MIR7853-201ENST00000584820 132 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
HNF4AP41235 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.36□□□□□ -1.55
HNF4AP41235 AC127024.6-201ENST00000621598 424 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 uc_338.7-201ENST00000621834 124 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 AC026124.2-201ENST00000621847 656 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HNF4AP41235 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.36□□□□□ -1.55
HNF4AP41235 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.36□□□□□ -1.55
HNF4AP41235 YES1P1-201ENST00000418510 1628 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
HNF4AP41235 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HNF4AP41235 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.36□□□□□ -1.55
HNF4AP41235 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.36□□□□□ -1.55
HNF4AP41235 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HNF4AP41235 AC006206.1-201ENST00000544842 3387 ntBASIC5.36□□□□□ -1.55
HNF4AP41235 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HNF4AP41235 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HNF4AP41235 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
HNF4AP41235 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HNF4AP41235 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HNF4AP41235 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HNF4AP41235 ABCC13-202ENST00000463099 3842 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HNF4AP41235 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HNF4AP41235 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HNF4AP41235 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HNF4AP41235 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HNF4AP41235 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HNF4AP41235 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.35□□□□□ -1.55
HNF4AP41235 AC093155.2-201ENST00000420734 937 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.35□□□□□ -1.55
HNF4AP41235 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.35□□□□□ -1.55
HNF4AP41235 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms