Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AL031601.1-201ENST00000605702 394 ntBASIC5.58□□□□□ -1.52
CASQ1P31415 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.58□□□□□ -1.52
CASQ1P31415 MIR6883-201ENST00000614952 78 ntBASIC5.58□□□□□ -1.52
CASQ1P31415 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.58□□□□□ -1.52
CASQ1P31415 OR8G3P-202ENST00000641572 1255 ntBASIC5.58□□□□□ -1.52
CASQ1P31415 AC008691.1-209ENST00000642094 814 ntBASIC5.58□□□□□ -1.52
CASQ1P31415 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CASQ1P31415 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CASQ1P31415 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CASQ1P31415 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CASQ1P31415 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CASQ1P31415 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.57□□□□□ -1.52
CASQ1P31415 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CASQ1P31415 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.57□□□□□ -1.52
CASQ1P31415 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CASQ1P31415 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CASQ1P31415 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CASQ1P31415 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CASQ1P31415 LINC01355-201ENST00000566551 5444 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 OR52B1P-201ENST00000316506 909 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.57□□□□□ -1.52
CASQ1P31415 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CASQ1P31415 RNU1-150P-201ENST00000362491 162 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CASQ1P31415 HSPA8P15-201ENST00000401676 786 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 RPS24P12-201ENST00000402084 394 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 RN7SKP125-201ENST00000410481 302 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 Z68694.1-201ENST00000413929 841 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 AC009238.2-201ENST00000431026 355 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 RPS26P4-201ENST00000431743 355 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 GSTM5P1-201ENST00000434751 660 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.57□□□□□ -1.52
CASQ1P31415 RPL12P49-201ENST00000441100 121 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 RPL7AP61-201ENST00000443410 636 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 AC099063.2-201ENST00000446360 662 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 AC093166.2-201ENST00000455969 1017 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CASQ1P31415 RBBP4P1-201ENST00000502424 1276 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 Y_RNA.667-201ENST00000516212 107 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 AGGF1P9-201ENST00000561884 913 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 AC005341.1-201ENST00000571086 708 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 MIR4502-201ENST00000580432 81 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.57□□□□□ -1.52
CASQ1P31415 AC015802.2-201ENST00000589690 189 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 AC005252.1-201ENST00000604518 1063 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 AC015849.6-201ENST00000605454 474 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 PPATP2-201ENST00000605635 508 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.57□□□□□ -1.52
CASQ1P31415 MTCO1P1-201ENST00000624263 1081 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CASQ1P31415 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CASQ1P31415 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CASQ1P31415 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CASQ1P31415 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CASQ1P31415 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CASQ1P31415 VN2R3P-201ENST00000422626 1412 ntBASIC5.57□□□□□ -1.52
CASQ1P31415 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CASQ1P31415 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CASQ1P31415 ASNSP1-201ENST00000518311 1939 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
CASQ1P31415 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CASQ1P31415 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CASQ1P31415 AC090971.4-201ENST00000560291 1800 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CASQ1P31415 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CASQ1P31415 MIR1203-201ENST00000408812 85 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 AC004690.1-201ENST00000418216 328 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 AL139158.1-201ENST00000424719 340 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 AC127526.2-201ENST00000426436 775 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.56□□□□□ -1.52
CASQ1P31415 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.56□□□□□ -1.52
CASQ1P31415 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.56□□□□□ -1.52
CASQ1P31415 AC073587.1-201ENST00000447093 876 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.56□□□□□ -1.52
CASQ1P31415 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CASQ1P31415 MTND6P32-201ENST00000457611 483 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 GYG1P1-201ENST00000460864 698 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 AC112206.1-201ENST00000468416 477 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 TRBV8-1-201ENST00000481590 279 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 AC073358.1-201ENST00000505671 684 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.56□□□□□ -1.52
CASQ1P31415 RNU6-615P-201ENST00000516065 106 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 AC027308.1-201ENST00000517993 110 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 AC134698.5-201ENST00000519444 336 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.56□□□□□ -1.52
CASQ1P31415 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CASQ1P31415 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.56□□□□□ -1.52
CASQ1P31415 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.56□□□□□ -1.52
CASQ1P31415 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.56□□□□□ -1.52
CASQ1P31415 RN7SL176P-201ENST00000580352 264 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 AC090312.1-201ENST00000580637 348 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 AC090774.2-201ENST00000584708 322 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CASQ1P31415 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CASQ1P31415 TAS2R6P-201ENST00000605022 826 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 uc_338.29-201ENST00000615099 168 ntBASIC5.56□□□□□ -1.52
CASQ1P31415 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.56□□□□□ -1.52
CASQ1P31415 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CASQ1P31415 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms