Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC009303.3-201ENST00000591103 736 ntBASIC4.84□□□□□ -1.63
SHC1P29353 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHC1P29353 IMMP1LP3-201ENST00000604197 224 ntBASIC4.84□□□□□ -1.63
SHC1P29353 AL158211.2-201ENST00000607282 395 ntBASIC4.84□□□□□ -1.63
SHC1P29353 AC244107.2-201ENST00000611773 76 ntBASIC4.84□□□□□ -1.63
SHC1P29353 AC020978.9-201ENST00000624380 1141 ntBASIC4.84□□□□□ -1.63
SHC1P29353 AC027279.1-201ENST00000568885 4284 ntBASIC4.84□□□□□ -1.64
SHC1P29353 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SHC1P29353 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.84□□□□□ -1.64
SHC1P29353 AL450345.1-202ENST00000605741 3881 ntBASIC4.84□□□□□ -1.64
SHC1P29353 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
SHC1P29353 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.84□□□□□ -1.64
SHC1P29353 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.84□□□□□ -1.64
SHC1P29353 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
SHC1P29353 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SHC1P29353 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SHC1P29353 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.83□□□□□ -1.64
SHC1P29353 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.83□□□□□ -1.64
SHC1P29353 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 THAP12P5-201ENST00000405864 2275 ntBASIC4.83□□□□□ -1.64
SHC1P29353 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.83□□□□□ -1.64
SHC1P29353 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SHC1P29353 U3.2-201ENST00000362981 210 ntBASIC4.83□□□□□ -1.64
SHC1P29353 RNU6-171P-201ENST00000384354 107 ntBASIC4.83□□□□□ -1.64
SHC1P29353 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.83□□□□□ -1.64
SHC1P29353 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.83□□□□□ -1.64
SHC1P29353 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.83□□□□□ -1.64
SHC1P29353 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 AC017019.1-201ENST00000426129 261 ntBASIC4.83□□□□□ -1.64
SHC1P29353 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.83□□□□□ -1.64
SHC1P29353 RPL12P17-201ENST00000432393 498 ntBASIC4.83□□□□□ -1.64
SHC1P29353 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.83□□□□□ -1.64
SHC1P29353 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.83□□□□□ -1.64
SHC1P29353 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.83□□□□□ -1.64
SHC1P29353 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.83□□□□□ -1.64
SHC1P29353 TPRKBP1-201ENST00000456243 481 ntBASIC4.83□□□□□ -1.64
SHC1P29353 PGAM1P13-201ENST00000507497 754 ntBASIC4.83□□□□□ -1.64
SHC1P29353 IMPA1P1-201ENST00000510718 842 ntBASIC4.83□□□□□ -1.64
SHC1P29353 EIF3KP3-201ENST00000514461 639 ntBASIC4.83□□□□□ -1.64
SHC1P29353 BX510359.5-201ENST00000515651 304 ntBASIC4.83□□□□□ -1.64
SHC1P29353 RNA5SP373-201ENST00000517271 95 ntBASIC4.83□□□□□ -1.64
SHC1P29353 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.83□□□□□ -1.64
SHC1P29353 AC019227.1-201ENST00000526902 510 ntBASIC4.83□□□□□ -1.64
SHC1P29353 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.83□□□□□ -1.64
SHC1P29353 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.83□□□□□ -1.64
SHC1P29353 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.83□□□□□ -1.64
SHC1P29353 AC040958.1-201ENST00000561102 201 ntBASIC4.83□□□□□ -1.64
SHC1P29353 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.83□□□□□ -1.64
SHC1P29353 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 RN7SL356P-201ENST00000582228 248 ntBASIC4.83□□□□□ -1.64
SHC1P29353 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.83□□□□□ -1.64
SHC1P29353 AC005972.3-201ENST00000606304 481 ntBASIC4.83□□□□□ -1.64
SHC1P29353 CYP4F35P-202ENST00000636121 390 ntBASIC4.83□□□□□ -1.64
SHC1P29353 AC099654.6-201ENST00000636487 512 ntBASIC4.83□□□□□ -1.64
SHC1P29353 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHC1P29353 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SHC1P29353 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHC1P29353 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
SHC1P29353 MIPEPP2-201ENST00000422560 1819 ntBASIC4.82□□□□□ -1.64
SHC1P29353 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHC1P29353 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SHC1P29353 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHC1P29353 RNA5SP183-201ENST00000362452 119 ntBASIC4.82□□□□□ -1.64
SHC1P29353 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SHC1P29353 SNORA81-201ENST00000408493 178 ntBASIC4.82□□□□□ -1.64
SHC1P29353 AC211486.3-201ENST00000412694 621 ntBASIC4.82□□□□□ -1.64
SHC1P29353 RPL12P9-201ENST00000412942 488 ntBASIC4.82□□□□□ -1.64
SHC1P29353 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.82□□□□□ -1.64
SHC1P29353 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
SHC1P29353 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SHC1P29353 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.82□□□□□ -1.64
SHC1P29353 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.82□□□□□ -1.64
SHC1P29353 NPM1P48-201ENST00000436002 853 ntBASIC4.82□□□□□ -1.64
SHC1P29353 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.82□□□□□ -1.64
SHC1P29353 MTND2P39-201ENST00000457230 764 ntBASIC4.82□□□□□ -1.64
SHC1P29353 AC021660.1-201ENST00000465006 554 ntBASIC4.82□□□□□ -1.64
SHC1P29353 RN7SL447P-201ENST00000494711 245 ntBASIC4.82□□□□□ -1.64
SHC1P29353 ASNSP4-201ENST00000511103 447 ntBASIC4.82□□□□□ -1.64
SHC1P29353 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.82□□□□□ -1.64
SHC1P29353 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.82□□□□□ -1.64
SHC1P29353 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.82□□□□□ -1.64
SHC1P29353 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHC1P29353 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.82□□□□□ -1.64
SHC1P29353 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.82□□□□□ -1.64
SHC1P29353 AC007225.2-201ENST00000562529 256 ntBASIC4.82□□□□□ -1.64
SHC1P29353 AC093591.2-201ENST00000565254 3843 ntBASIC4.82□□□□□ -1.64
SHC1P29353 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms