Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.57□□□□□ -1.68
USF1P22415 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.57□□□□□ -1.68
USF1P22415 AC234781.4-201ENST00000419384 244 ntBASIC4.57□□□□□ -1.68
USF1P22415 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.57□□□□□ -1.68
USF1P22415 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.57□□□□□ -1.68
USF1P22415 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.57□□□□□ -1.68
USF1P22415 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.57□□□□□ -1.68
USF1P22415 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.57□□□□□ -1.68
USF1P22415 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.57□□□□□ -1.68
USF1P22415 LINC02210-201ENST00000444561 288 ntBASIC4.57□□□□□ -1.68
USF1P22415 RPS23P9-201ENST00000448848 438 ntBASIC4.57□□□□□ -1.68
USF1P22415 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.57□□□□□ -1.68
USF1P22415 AL389915.2-201ENST00000454576 441 ntBASIC4.57□□□□□ -1.68
USF1P22415 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USF1P22415 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.57□□□□□ -1.68
USF1P22415 RPS17P5-201ENST00000498293 408 ntBASIC4.57□□□□□ -1.68
USF1P22415 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.57□□□□□ -1.68
USF1P22415 NDUFB5P1-201ENST00000508134 564 ntBASIC4.57□□□□□ -1.68
USF1P22415 HMGB1P44-201ENST00000508597 572 ntBASIC4.57□□□□□ -1.68
USF1P22415 MTND6P2-201ENST00000512226 524 ntBASIC4.57□□□□□ -1.68
USF1P22415 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.57□□□□□ -1.68
USF1P22415 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.57□□□□□ -1.68
USF1P22415 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
USF1P22415 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.57□□□□□ -1.68
USF1P22415 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USF1P22415 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.57□□□□□ -1.68
USF1P22415 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.57□□□□□ -1.68
USF1P22415 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.57□□□□□ -1.68
USF1P22415 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.57□□□□□ -1.68
USF1P22415 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.57□□□□□ -1.68
USF1P22415 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.57□□□□□ -1.68
USF1P22415 AL451049.1-201ENST00000608672 497 ntBASIC4.57□□□□□ -1.68
USF1P22415 AL049539.1-201ENST00000611964 459 ntBASIC4.57□□□□□ -1.68
USF1P22415 AP002799.1-201ENST00000623552 423 ntBASIC4.57□□□□□ -1.68
USF1P22415 AP003400.2-201ENST00000624036 666 ntBASIC4.57□□□□□ -1.68
USF1P22415 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
USF1P22415 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
USF1P22415 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.57□□□□□ -1.68
USF1P22415 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
USF1P22415 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.57□□□□□ -1.68
USF1P22415 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
USF1P22415 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.57□□□□□ -1.68
USF1P22415 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.57□□□□□ -1.68
USF1P22415 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.56□□□□□ -1.68
USF1P22415 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
USF1P22415 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
USF1P22415 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 RNU1-43P-201ENST00000365052 165 ntBASIC4.56□□□□□ -1.68
USF1P22415 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 AL133388.1-201ENST00000404509 287 ntBASIC4.56□□□□□ -1.68
USF1P22415 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.56□□□□□ -1.68
USF1P22415 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.56□□□□□ -1.68
USF1P22415 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.56□□□□□ -1.68
USF1P22415 HSPE1P16-201ENST00000426640 348 ntBASIC4.56□□□□□ -1.68
USF1P22415 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.56□□□□□ -1.68
USF1P22415 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.56□□□□□ -1.68
USF1P22415 GSTM5P1-201ENST00000434751 660 ntBASIC4.56□□□□□ -1.68
USF1P22415 AL596266.1-201ENST00000448132 400 ntBASIC4.56□□□□□ -1.68
USF1P22415 AC073850.1-201ENST00000449243 255 ntBASIC4.56□□□□□ -1.68
USF1P22415 OR52Y1P-201ENST00000452418 828 ntBASIC4.56□□□□□ -1.68
USF1P22415 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
USF1P22415 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 RN7SKP66-201ENST00000516681 231 ntBASIC4.56□□□□□ -1.68
USF1P22415 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.56□□□□□ -1.68
USF1P22415 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.56□□□□□ -1.68
USF1P22415 OR4A17P-201ENST00000526032 904 ntBASIC4.56□□□□□ -1.68
USF1P22415 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.56□□□□□ -1.68
USF1P22415 EIF4EP5-201ENST00000528228 640 ntBASIC4.56□□□□□ -1.68
USF1P22415 OR5D15P-201ENST00000531671 942 ntBASIC4.56□□□□□ -1.68
USF1P22415 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.56□□□□□ -1.68
USF1P22415 AL390334.1-201ENST00000556395 450 ntBASIC4.56□□□□□ -1.68
USF1P22415 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.56□□□□□ -1.68
USF1P22415 AC106730.2-201ENST00000566641 540 ntBASIC4.56□□□□□ -1.68
USF1P22415 RBM22P1-201ENST00000578589 1214 ntBASIC4.56□□□□□ -1.68
USF1P22415 DHFRP1-201ENST00000579682 559 ntBASIC4.56□□□□□ -1.68
USF1P22415 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.56□□□□□ -1.68
USF1P22415 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.56□□□□□ -1.68
USF1P22415 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.56□□□□□ -1.68
USF1P22415 AC007786.3-201ENST00000615154 596 ntBASIC4.56□□□□□ -1.68
USF1P22415 AC138627.1-204ENST00000641894 765 ntBASIC4.56□□□□□ -1.68
USF1P22415 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 AC245100.2-201ENST00000454544 1679 ntBASIC4.56□□□□□ -1.68
USF1P22415 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.56□□□□□ -1.68
USF1P22415 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
USF1P22415 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.56□□□□□ -1.68
USF1P22415 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.56□□□□□ -1.68
USF1P22415 CUL4AP1-201ENST00000514750 1863 ntBASIC4.56□□□□□ -1.68
USF1P22415 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USF1P22415 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.56□□□□□ -1.68
USF1P22415 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms