Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 RNU6-819P-201ENST00000364116 107 ntBASIC5.37□□□□□ -1.55
CDH3P22223 RNU6-670P-201ENST00000364312 104 ntBASIC5.37□□□□□ -1.55
CDH3P22223 RN7SKP6-201ENST00000364795 319 ntBASIC5.37□□□□□ -1.55
CDH3P22223 AC005522.1-201ENST00000395416 346 ntBASIC5.37□□□□□ -1.55
CDH3P22223 VDAC2P1-201ENST00000399358 958 ntBASIC5.37□□□□□ -1.55
CDH3P22223 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH3P22223 CTSL3P-202ENST00000412179 788 ntBASIC5.37□□□□□ -1.55
CDH3P22223 NPM1P4-201ENST00000414095 812 ntBASIC5.37□□□□□ -1.55
CDH3P22223 OR51A6P-201ENST00000418680 1004 ntBASIC5.37□□□□□ -1.55
CDH3P22223 MARK2P12-201ENST00000420129 585 ntBASIC5.37□□□□□ -1.55
CDH3P22223 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH3P22223 SPRYD7P1-201ENST00000443861 570 ntBASIC5.37□□□□□ -1.55
CDH3P22223 AL589765.3-201ENST00000446084 462 ntBASIC5.37□□□□□ -1.55
CDH3P22223 AL591363.1-201ENST00000450091 483 ntBASIC5.37□□□□□ -1.55
CDH3P22223 RANP1-206ENST00000455094 651 ntBASIC5.37□□□□□ -1.55
CDH3P22223 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH3P22223 AC016687.1-201ENST00000482574 353 ntBASIC5.37□□□□□ -1.55
CDH3P22223 RN7SL547P-201ENST00000490793 290 ntBASIC5.37□□□□□ -1.55
CDH3P22223 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH3P22223 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 IGKV2-18-201ENST00000522607 343 ntBASIC5.37□□□□□ -1.55
CDH3P22223 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.37□□□□□ -1.55
CDH3P22223 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH3P22223 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.37□□□□□ -1.55
CDH3P22223 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH3P22223 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH3P22223 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH3P22223 MIR4489-201ENST00000578869 62 ntBASIC5.37□□□□□ -1.55
CDH3P22223 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH3P22223 MIR3176-201ENST00000582210 90 ntBASIC5.37□□□□□ -1.55
CDH3P22223 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH3P22223 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH3P22223 AC012616.1-201ENST00000600294 197 ntBASIC5.37□□□□□ -1.55
CDH3P22223 KATNBL1P1-201ENST00000605192 748 ntBASIC5.37□□□□□ -1.55
CDH3P22223 AC025574.2-201ENST00000615621 514 ntBASIC5.37□□□□□ -1.55
CDH3P22223 AL162574.1-201ENST00000615702 950 ntBASIC5.37□□□□□ -1.55
CDH3P22223 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 AC005840.5-201ENST00000619166 599 ntBASIC5.37□□□□□ -1.55
CDH3P22223 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CDH3P22223 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH3P22223 FRG1EP-201ENST00000634469 770 ntBASIC5.37□□□□□ -1.55
CDH3P22223 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CDH3P22223 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 CIR1P2-201ENST00000514821 1342 ntBASIC5.37□□□□□ -1.55
CDH3P22223 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH3P22223 RARSP1-201ENST00000542842 1418 ntBASIC5.37□□□□□ -1.55
CDH3P22223 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH3P22223 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH3P22223 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH3P22223 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CDH3P22223 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CDH3P22223 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH3P22223 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH3P22223 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH3P22223 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH3P22223 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CDH3P22223 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH3P22223 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH3P22223 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH3P22223 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH3P22223 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH3P22223 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH3P22223 GAPDHP24-201ENST00000328713 983 ntBASIC5.36□□□□□ -1.55
CDH3P22223 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH3P22223 RNU1-136P-201ENST00000384181 164 ntBASIC5.36□□□□□ -1.55
CDH3P22223 MT-RNR1-201ENST00000389680 954 ntBASIC5.36□□□□□ -1.55
CDH3P22223 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH3P22223 AC096921.1-201ENST00000411661 375 ntBASIC5.36□□□□□ -1.55
CDH3P22223 AC096644.3-201ENST00000416788 338 ntBASIC5.36□□□□□ -1.55
CDH3P22223 GTF3AP1-201ENST00000416942 1004 ntBASIC5.36□□□□□ -1.55
CDH3P22223 RNF10P1-201ENST00000418589 369 ntBASIC5.36□□□□□ -1.55
CDH3P22223 OR6D1P-201ENST00000436165 939 ntBASIC5.36□□□□□ -1.55
CDH3P22223 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH3P22223 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH3P22223 AC089999.1-201ENST00000460336 374 ntBASIC5.36□□□□□ -1.55
CDH3P22223 RPL5P22-201ENST00000480199 884 ntBASIC5.36□□□□□ -1.55
CDH3P22223 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.36□□□□□ -1.55
CDH3P22223 AC090638.1-201ENST00000498296 909 ntBASIC5.36□□□□□ -1.55
CDH3P22223 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH3P22223 ATG10-AS1-201ENST00000504846 648 ntBASIC5.36□□□□□ -1.55
CDH3P22223 ENPP7P11-201ENST00000505915 627 ntBASIC5.36□□□□□ -1.55
CDH3P22223 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH3P22223 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH3P22223 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH3P22223 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH3P22223 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH3P22223 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH3P22223 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH3P22223 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH3P22223 MIR3936-201ENST00000584304 110 ntBASIC5.36□□□□□ -1.55
CDH3P22223 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CDH3P22223 AC067838.1-201ENST00000606064 577 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms