Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 OR8G5-201ENST00000524943 1041 ntBASIC8.67□□□□□ -1.02
TOP2AP11388 MIR4675-201ENST00000577898 77 ntBASIC8.67□□□□□ -1.02
TOP2AP11388 AC008782.1-201ENST00000603386 430 ntBASIC8.67□□□□□ -1.02
TOP2AP11388 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC8.67□□□□□ -1.02
TOP2AP11388 AC010424.2-201ENST00000607594 443 ntBASIC8.67□□□□□ -1.02
TOP2AP11388 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC8.67□□□□□ -1.02
TOP2AP11388 AL162574.1-201ENST00000615702 950 ntBASIC8.67□□□□□ -1.02
TOP2AP11388 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TOP2AP11388 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TOP2AP11388 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
TOP2AP11388 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC8.67□□□□□ -1.02
TOP2AP11388 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.67□□□□□ -1.02
TOP2AP11388 OR56B2P-202ENST00000641377 2453 ntBASIC8.67□□□□□ -1.02
TOP2AP11388 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
TOP2AP11388 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.66□□□□□ -1.02
TOP2AP11388 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC8.66□□□□□ -1.02
TOP2AP11388 Y_RNA.126-201ENST00000363382 111 ntBASIC8.66□□□□□ -1.02
TOP2AP11388 AL592293.2-201ENST00000422292 996 ntBASIC8.66□□□□□ -1.02
TOP2AP11388 RPL12P34-201ENST00000424532 479 ntBASIC8.66□□□□□ -1.02
TOP2AP11388 GAPDHP14-201ENST00000450472 937 ntBASIC8.66□□□□□ -1.02
TOP2AP11388 AC027369.5-201ENST00000533838 755 ntBASIC8.66□□□□□ -1.02
TOP2AP11388 AC079414.3-201ENST00000612986 1090 ntBASIC8.66□□□□□ -1.02
TOP2AP11388 AC011944.2-201ENST00000624440 683 ntBASIC8.66□□□□□ -1.02
TOP2AP11388 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
TOP2AP11388 AC133552.1-201ENST00000569988 4007 ntBASIC8.66□□□□□ -1.02
TOP2AP11388 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TOP2AP11388 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC8.66□□□□□ -1.02
TOP2AP11388 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TOP2AP11388 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
TOP2AP11388 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TOP2AP11388 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
TOP2AP11388 RPL10P17-201ENST00000453852 316 ntBASIC8.65□□□□□ -1.02
TOP2AP11388 NDUFAF4P3-201ENST00000456468 525 ntBASIC8.65□□□□□ -1.02
TOP2AP11388 AK3P4-201ENST00000504283 583 ntBASIC8.65□□□□□ -1.02
TOP2AP11388 CDV3-208ENST00000511392 554 ntTSL 5 BASIC8.65□□□□□ -1.02
TOP2AP11388 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC8.65□□□□□ -1.02
TOP2AP11388 AC116553.2-201ENST00000564203 463 ntBASIC8.65□□□□□ -1.02
TOP2AP11388 AC022884.2-201ENST00000578535 580 ntBASIC8.65□□□□□ -1.02
TOP2AP11388 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC8.65□□□□□ -1.02
TOP2AP11388 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TOP2AP11388 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC8.65□□□□□ -1.02
TOP2AP11388 AC093388.1-201ENST00000609166 430 ntBASIC8.65□□□□□ -1.02
TOP2AP11388 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
TOP2AP11388 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC8.65□□□□□ -1.02
TOP2AP11388 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TOP2AP11388 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.02
TOP2AP11388 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.65□□□□□ -1.02
TOP2AP11388 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TOP2AP11388 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC8.65□□□□□ -1.02
TOP2AP11388 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC8.65□□□□□ -1.02
TOP2AP11388 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TOP2AP11388 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
TOP2AP11388 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
TOP2AP11388 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
TOP2AP11388 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
TOP2AP11388 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
TOP2AP11388 SNORA73.1-201ENST00000363107 205 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 AL357515.1-201ENST00000402967 542 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 RN7SKP17-201ENST00000411242 351 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 AC091180.1-201ENST00000462104 372 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 AC083829.1-201ENST00000503756 657 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC8.64□□□□□ -1.03
TOP2AP11388 BUD31P1-201ENST00000521828 359 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC8.64□□□□□ -1.03
TOP2AP11388 AC103792.1-201ENST00000603591 919 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 IGKV1OR2-9-201ENST00000603957 287 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TOP2AP11388 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
TOP2AP11388 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TOP2AP11388 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TOP2AP11388 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
TOP2AP11388 AC010168.2-201ENST00000562691 5428 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TOP2AP11388 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TOP2AP11388 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
TOP2AP11388 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TOP2AP11388 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC8.64□□□□□ -1.03
TOP2AP11388 ATG4AP1-201ENST00000416893 538 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC8.64□□□□□ -1.03
TOP2AP11388 AC004975.1-201ENST00000428733 208 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC8.64□□□□□ -1.03
TOP2AP11388 AC009963.2-201ENST00000453431 138 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 RPL7AP28-201ENST00000464513 571 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC8.64□□□□□ -1.03
TOP2AP11388 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC8.64□□□□□ -1.03
TOP2AP11388 AL049839.1-201ENST00000556151 657 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 AC074050.1-201ENST00000563247 211 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC8.64□□□□□ -1.03
TOP2AP11388 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC8.64□□□□□ -1.03
TOP2AP11388 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TOP2AP11388 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TOP2AP11388 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
TOP2AP11388 CCT8P1-201ENST00000413611 1657 ntBASIC8.64□□□□□ -1.03
TOP2AP11388 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TOP2AP11388 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC8.63□□□□□ -1.03
TOP2AP11388 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC8.63□□□□□ -1.03
TOP2AP11388 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
TOP2AP11388 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
TOP2AP11388 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms