Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.68□□□□□ -1.5
TPM1P09493 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.68□□□□□ -1.5
TPM1P09493 AL358913.1-201ENST00000554342 121 ntBASIC5.68□□□□□ -1.5
TPM1P09493 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.68□□□□□ -1.5
TPM1P09493 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.68□□□□□ -1.5
TPM1P09493 AC010547.7-201ENST00000570323 333 ntBASIC5.68□□□□□ -1.5
TPM1P09493 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.68□□□□□ -1.5
TPM1P09493 AC079315.1-201ENST00000602952 623 ntBASIC5.68□□□□□ -1.5
TPM1P09493 AC067773.1-201ENST00000603284 1094 ntBASIC5.68□□□□□ -1.5
TPM1P09493 BNIP3P35-201ENST00000604530 490 ntBASIC5.68□□□□□ -1.5
TPM1P09493 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TPM1P09493 AC118658.2-201ENST00000618697 459 ntBASIC5.68□□□□□ -1.5
TPM1P09493 AC074101.1-201ENST00000637861 241 ntBASIC5.68□□□□□ -1.5
TPM1P09493 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TPM1P09493 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TPM1P09493 AC027279.1-201ENST00000568885 4284 ntBASIC5.68□□□□□ -1.5
TPM1P09493 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TPM1P09493 TTC39DP-201ENST00000416781 1688 ntBASIC5.68□□□□□ -1.5
TPM1P09493 AC245100.2-201ENST00000454544 1679 ntBASIC5.68□□□□□ -1.5
TPM1P09493 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
TPM1P09493 AL929601.4-201ENST00000613011 1341 ntBASIC5.68□□□□□ -1.5
TPM1P09493 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
TPM1P09493 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TPM1P09493 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.67□□□□□ -1.5
TPM1P09493 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TPM1P09493 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TPM1P09493 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TPM1P09493 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.67□□□□□ -1.5
TPM1P09493 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TPM1P09493 MAPK10-286ENST00000641208 8747 ntBASIC5.67□□□□□ -1.5
TPM1P09493 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TPM1P09493 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TPM1P09493 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TPM1P09493 AC023490.2-201ENST00000359859 470 ntBASIC5.67□□□□□ -1.5
TPM1P09493 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TPM1P09493 AL133388.1-201ENST00000404509 287 ntBASIC5.67□□□□□ -1.5
TPM1P09493 RN7SKP16-201ENST00000410180 299 ntBASIC5.67□□□□□ -1.5
TPM1P09493 RN7SKP199-201ENST00000410325 305 ntBASIC5.67□□□□□ -1.5
TPM1P09493 EEF1B2P8-201ENST00000414101 671 ntBASIC5.67□□□□□ -1.5
TPM1P09493 AC004980.3-201ENST00000447046 365 ntBASIC5.67□□□□□ -1.5
TPM1P09493 GYG1P1-201ENST00000460864 698 ntBASIC5.67□□□□□ -1.5
TPM1P09493 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.67□□□□□ -1.5
TPM1P09493 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.67□□□□□ -1.5
TPM1P09493 HMGB1P40-201ENST00000525121 540 ntBASIC5.67□□□□□ -1.5
TPM1P09493 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.67□□□□□ -1.5
TPM1P09493 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.67□□□□□ -1.5
TPM1P09493 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.67□□□□□ -1.5
TPM1P09493 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.67□□□□□ -1.5
TPM1P09493 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.67□□□□□ -1.5
TPM1P09493 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.67□□□□□ -1.5
TPM1P09493 AC097505.1-201ENST00000610199 565 ntBASIC5.67□□□□□ -1.5
TPM1P09493 MTCO1P1-201ENST00000624263 1081 ntBASIC5.67□□□□□ -1.5
TPM1P09493 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TPM1P09493 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TPM1P09493 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.67□□□□□ -1.5
TPM1P09493 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TPM1P09493 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.67□□□□□ -1.5
TPM1P09493 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
TPM1P09493 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TPM1P09493 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.66□□□□□ -1.5
TPM1P09493 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
TPM1P09493 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TPM1P09493 MTND5P23-201ENST00000430812 1655 ntBASIC5.66□□□□□ -1.5
TPM1P09493 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.66□□□□□ -1.5
TPM1P09493 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
TPM1P09493 COX6CP13-201ENST00000428703 226 ntBASIC5.66□□□□□ -1.5
TPM1P09493 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.66□□□□□ -1.5
TPM1P09493 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.66□□□□□ -1.5
TPM1P09493 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.66□□□□□ -1.5
TPM1P09493 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.66□□□□□ -1.5
TPM1P09493 AC104634.1-201ENST00000452720 462 ntBASIC5.66□□□□□ -1.5
TPM1P09493 CTSLP6-201ENST00000458273 1002 ntBASIC5.66□□□□□ -1.5
TPM1P09493 AC108161.1-201ENST00000461060 402 ntBASIC5.66□□□□□ -1.5
TPM1P09493 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.66□□□□□ -1.5
TPM1P09493 AC020779.1-201ENST00000478757 796 ntBASIC5.66□□□□□ -1.5
TPM1P09493 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.66□□□□□ -1.5
TPM1P09493 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.66□□□□□ -1.5
TPM1P09493 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.66□□□□□ -1.5
TPM1P09493 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.66□□□□□ -1.5
TPM1P09493 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.66□□□□□ -1.5
TPM1P09493 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.66□□□□□ -1.5
TPM1P09493 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.66□□□□□ -1.5
TPM1P09493 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.66□□□□□ -1.5
TPM1P09493 AC008814.1-201ENST00000603797 406 ntBASIC5.66□□□□□ -1.5
TPM1P09493 AC108359.1-201ENST00000616451 1211 ntBASIC5.66□□□□□ -1.5
TPM1P09493 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.66□□□□□ -1.5
TPM1P09493 AL034370.1-201ENST00000397254 1590 ntBASIC5.66□□□□□ -1.5
TPM1P09493 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TPM1P09493 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TPM1P09493 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.66□□□□□ -1.5
TPM1P09493 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TPM1P09493 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TPM1P09493 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TPM1P09493 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TPM1P09493 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TPM1P09493 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.65□□□□□ -1.5
TPM1P09493 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TPM1P09493 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TPM1P09493 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TPM1P09493 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms