Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC4P09017 BNIP3P32-201ENST00000600015 554 ntBASIC5.1□□□□□ -1.59
HOXC4P09017 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC4P09017 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC4P09017 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC4P09017 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
HOXC4P09017 AC010809.3-201ENST00000621310 641 ntBASIC5.1□□□□□ -1.59
HOXC4P09017 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC4P09017 AC015660.5-201ENST00000623238 564 ntBASIC5.1□□□□□ -1.59
HOXC4P09017 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.1□□□□□ -1.59
HOXC4P09017 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC4P09017 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC4P09017 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC4P09017 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.1□□□□□ -1.59
HOXC4P09017 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC4P09017 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC4P09017 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC4P09017 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
HOXC4P09017 ICE2P1-201ENST00000512800 1849 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC4P09017 AL138820.1-201ENST00000617901 5305 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 AP005432.1-201ENST00000580891 3485 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
HOXC4P09017 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HOXC4P09017 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC4P09017 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC4P09017 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
HOXC4P09017 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
HOXC4P09017 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HOXC4P09017 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
HOXC4P09017 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC4P09017 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HOXC4P09017 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HOXC4P09017 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC4P09017 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC4P09017 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC4P09017 MIR550A3-201ENST00000390735 95 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC4P09017 RN7SKP114-201ENST00000410327 279 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC4P09017 RPL19P16-201ENST00000433839 588 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 AC090018.1-201ENST00000434369 367 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC4P09017 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC4P09017 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC4P09017 RPL12P3-201ENST00000440080 396 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC4P09017 AL645937.3-201ENST00000453647 936 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 HMGN2P25-201ENST00000486956 268 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXC4P09017 RPS26P24-201ENST00000497656 331 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
HOXC4P09017 AC097173.1-201ENST00000505862 819 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 IMPA1P1-201ENST00000510718 842 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC4P09017 RNU6-1334P-201ENST00000516032 105 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC4P09017 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC4P09017 AC007066.2-202ENST00000566531 914 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC4P09017 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC4P09017 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC4P09017 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXC4P09017 AL022394.1-201ENST00000606979 292 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 EIF3FP1-201ENST00000613970 806 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC4P09017 AC090510.2-201ENST00000617465 629 ntBASIC5.09□□□□□ -1.59
HOXC4P09017 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC4P09017 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC4P09017 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXC4P09017 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HOXC4P09017 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HOXC4P09017 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC4P09017 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
HOXC4P09017 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.6
HOXC4P09017 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HOXC4P09017 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
HOXC4P09017 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
HOXC4P09017 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
HOXC4P09017 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXC4P09017 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HOXC4P09017 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXC4P09017 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXC4P09017 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC4P09017 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXC4P09017 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
HOXC4P09017 RN7SKP113-201ENST00000363891 295 ntBASIC5.08□□□□□ -1.6
HOXC4P09017 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXC4P09017 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC4P09017 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.08□□□□□ -1.6
HOXC4P09017 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.08□□□□□ -1.6
HOXC4P09017 RPS27AP6-201ENST00000427962 448 ntBASIC5.08□□□□□ -1.6
HOXC4P09017 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.08□□□□□ -1.6
HOXC4P09017 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXC4P09017 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.08□□□□□ -1.6
HOXC4P09017 BX842559.2-201ENST00000451418 605 ntBASIC5.08□□□□□ -1.6
HOXC4P09017 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXC4P09017 RN7SL244P-201ENST00000493405 297 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms