Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXN3O00409 RPL22P22-201ENST00000395439 379 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AC010385.1-201ENST00000412374 256 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 RPS6P23-201ENST00000413224 722 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AC245060.4-201ENST00000413293 1121 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 HYALP1-201ENST00000417674 1279 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 RNF10P1-201ENST00000418589 369 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXN3O00409 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.06□□□□□ -1.44
FOXN3O00409 RPL24P2-201ENST00000421023 475 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXN3O00409 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.06□□□□□ -1.44
FOXN3O00409 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXN3O00409 AC138761.5-201ENST00000433967 325 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXN3O00409 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXN3O00409 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXN3O00409 AP006222.1-205ENST00000450734 457 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 CYCSP42-201ENST00000450823 238 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXN3O00409 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXN3O00409 MRE11P1-201ENST00000464884 2127 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 RPS23P6-201ENST00000466136 431 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 NENFP3-201ENST00000503735 313 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 PRELID3BP6-201ENST00000503839 571 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXN3O00409 DUTP7-201ENST00000507982 486 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 GLUD1P3-202ENST00000508551 200 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXN3O00409 AC110760.3-202ENST00000515177 371 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AC010476.1-201ENST00000519111 851 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AP000916.1-201ENST00000533869 835 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.06□□□□□ -1.44
FOXN3O00409 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.06□□□□□ -1.44
FOXN3O00409 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXN3O00409 AC023825.1-201ENST00000566704 1030 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AL158211.1-201ENST00000566763 763 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 RN7SL339P-201ENST00000580597 296 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AP000919.1-202ENST00000581139 1264 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXN3O00409 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXN3O00409 AC008507.2-201ENST00000588402 1176 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AC011492.1-201ENST00000600023 315 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AC112503.1-201ENST00000608436 391 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AL050303.3-201ENST00000613704 284 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXN3O00409 AP004607.9-201ENST00000618202 316 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AL512427.1-201ENST00000618593 349 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AC007275.1-201ENST00000621243 671 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AC073342.3-201ENST00000624211 193 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXN3O00409 AC005618.4-201ENST00000625053 554 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 AC129915.3-201ENST00000634128 948 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXN3O00409 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXN3O00409 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXN3O00409 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.06□□□□□ -1.44
FOXN3O00409 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXN3O00409 AC018809.2-201ENST00000602436 3823 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.06□□□□□ -1.44
FOXN3O00409 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXN3O00409 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
FOXN3O00409 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.05□□□□□ -1.44
FOXN3O00409 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
FOXN3O00409 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FOXN3O00409 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
FOXN3O00409 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.05□□□□□ -1.44
FOXN3O00409 AC092451.3-201ENST00000625067 1343 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXN3O00409 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXN3O00409 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FOXN3O00409 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.05□□□□□ -1.44
FOXN3O00409 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FOXN3O00409 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.05□□□□□ -1.44
FOXN3O00409 RNA5SP30-201ENST00000365552 115 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 RNU11-201ENST00000387069 134 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
FOXN3O00409 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXN3O00409 LYPLA1P3-201ENST00000402650 695 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 VN1R12P-201ENST00000403778 876 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.05□□□□□ -1.44
FOXN3O00409 AL034374.1-201ENST00000406329 351 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXN3O00409 PNRC2P1-201ENST00000423940 420 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXN3O00409 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 NANOGP9-201ENST00000439890 892 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.05□□□□□ -1.44
FOXN3O00409 AL596266.1-201ENST00000448132 400 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXN3O00409 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.05□□□□□ -1.44
FOXN3O00409 TPT1P3-201ENST00000492841 512 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AC010374.1-201ENST00000503762 1237 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 SUMO2P5-201ENST00000506790 245 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FOXN3O00409 SNORA31.13-201ENST00000516624 135 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 RNA5SP271-201ENST00000516700 88 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AC013701.1-201ENST00000522657 465 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AC005363.1-201ENST00000530779 351 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms