Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 RPL12P3-201ENST00000440080 396 ntBASIC4.93□□□□□ -1.62
CCDC88CQ9P219 RPS12P31-201ENST00000491419 398 ntBASIC4.93□□□□□ -1.62
CCDC88CQ9P219 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 CR383656.6-201ENST00000550518 394 ntBASIC4.93□□□□□ -1.62
CCDC88CQ9P219 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 AC005341.1-201ENST00000571086 708 ntBASIC4.93□□□□□ -1.62
CCDC88CQ9P219 AC019322.1-201ENST00000571869 389 ntBASIC4.93□□□□□ -1.62
CCDC88CQ9P219 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 AL121839.2-201ENST00000565058 6943 ntBASIC4.93□□□□□ -1.62
CCDC88CQ9P219 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC88CQ9P219 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 RNA5SP487-201ENST00000410186 122 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AC093162.1-201ENST00000419682 124 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 BX119904.3-201ENST00000428194 957 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 RPS11P7-201ENST00000442125 465 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 BX842559.2-201ENST00000451418 605 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AC092324.1-201ENST00000468671 324 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AC098976.1-201ENST00000513014 541 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 EIF4A2P5-201ENST00000529914 499 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 OR1F2P-201ENST00000570470 933 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AC090607.5-201ENST00000615692 224 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 MAPK10-338ENST00000641647 3362 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AP005432.1-201ENST00000580891 3485 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 RN7SKP126-201ENST00000411143 300 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 VTI1BP4-201ENST00000427516 527 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AL645937.3-201ENST00000453647 936 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 RPL35AP28-201ENST00000459730 331 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 RPL7P16-201ENST00000479738 738 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AP000676.2-201ENST00000529711 301 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 OR5D15P-201ENST00000531671 942 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AC118658.2-201ENST00000618697 459 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 AC119674.1-217ENST00000641942 1086 ntBASIC4.92□□□□□ -1.62
CCDC88CQ9P219 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC88CQ9P219 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC88CQ9P219 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC88CQ9P219 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.91□□□□□ -1.62
CCDC88CQ9P219 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC88CQ9P219 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CCDC88CQ9P219 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC88CQ9P219 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC88CQ9P219 RPS23P1-201ENST00000491662 432 ntBASIC4.91□□□□□ -1.62
CCDC88CQ9P219 RN7SKP147-201ENST00000517154 244 ntBASIC4.91□□□□□ -1.62
CCDC88CQ9P219 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC88CQ9P219 AC079064.1-201ENST00000528365 362 ntBASIC4.91□□□□□ -1.62
CCDC88CQ9P219 AP002373.2-201ENST00000541631 1060 ntBASIC4.91□□□□□ -1.62
CCDC88CQ9P219 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC88CQ9P219 AC116651.1-201ENST00000609724 556 ntBASIC4.91□□□□□ -1.62
CCDC88CQ9P219 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC88CQ9P219 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC88CQ9P219 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC88CQ9P219 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC88CQ9P219 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CCDC88CQ9P219 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC88CQ9P219 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms