Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC011447.2-201ENST00000592921 283 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AL390877.1-201ENST00000605704 214 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AL451074.6-201ENST00000608512 729 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AL354976.1-201ENST00000613843 387 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC092140.2-201ENST00000618027 521 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC005840.5-201ENST00000619166 599 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 MRPL57P3-201ENST00000619218 176 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC010608.2-201ENST00000624830 470 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 ATE1-AS1-202ENST00000636460 506 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC025263.3-201ENST00000622965 1396 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 DCAF13P3-201ENST00000561147 1334 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AL355852.1-201ENST00000454081 1771 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 MFSD8-219ENST00000641228 2559 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC004014.2-201ENST00000623718 5122 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 RN7SKP171-201ENST00000364417 303 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 SNORA70.3-201ENST00000365075 132 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 SNORD116-9-201ENST00000384000 95 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 SNORD116-3-201ENST00000384287 95 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 SNORD116-7-201ENST00000384404 95 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 SNORD116-5-201ENST00000384462 95 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 SEPT2P1-201ENST00000419651 180 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AL354941.1-201ENST00000438600 464 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 TXNP5-201ENST00000441043 315 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 UBE2D3P4-201ENST00000441973 436 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 MTND2P4-201ENST00000445034 1004 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 YWHAQP9-201ENST00000445891 512 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 RN7SL83P-201ENST00000468131 297 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 GAPDHP36-201ENST00000480688 918 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 LINC00888-204ENST00000487386 421 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC111000.2-201ENST00000507775 550 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 RNA5SP473-201ENST00000516402 125 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 RNU6-232P-201ENST00000517144 64 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AP003033.2-201ENST00000528901 805 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC026458.1-201ENST00000564330 438 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 RN7SL270P-201ENST00000579643 281 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 NBR2-204ENST00000587322 63 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC011921.2-201ENST00000589465 152 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC012557.2-201ENST00000605919 418 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC016717.3-201ENST00000624730 554 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC005858.3-201ENST00000624756 589 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 IFIT1P1-201ENST00000400497 1449 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC021755.1-201ENST00000559747 1447 ntBASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms