Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 RPL12P17-201ENST00000432393 498 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC090018.1-201ENST00000434369 367 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC073109.1-201ENST00000445066 978 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC245028.2-201ENST00000458673 253 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC108157.1-201ENST00000510511 539 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 RNU6-491P-201ENST00000516099 110 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC022360.1-201ENST00000521058 340 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC100784.1-201ENST00000522790 310 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 CR383656.14-201ENST00000551951 406 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 RN7SL356P-201ENST00000582228 248 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC100767.2-201ENST00000604840 693 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 RNU6-84P-201ENST00000607737 102 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC016542.1-201ENST00000608259 493 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC109583.2-201ENST00000617367 129 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC008691.1-209ENST00000642094 814 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC068446.1-201ENST00000556425 1549 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AL512283.1-201ENST00000606756 1384 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AC003985.2-201ENST00000562268 1669 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AC023490.2-201ENST00000359859 470 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 RNA5SP394-201ENST00000364216 119 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 HMGB1P20-201ENST00000402555 677 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AL357078.2-201ENST00000416486 427 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 NAP1L4P2-201ENST00000425958 899 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AL590762.3-201ENST00000436372 640 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AL691517.1-201ENST00000440833 1235 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AC005297.1-201ENST00000444765 862 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 COX6B1P2-201ENST00000489624 230 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AC106806.2-201ENST00000509365 500 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 RNA5SP271-201ENST00000516700 88 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 MIR3614-201ENST00000581261 86 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AC008521.2-201ENST00000591021 259 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AC027243.2-201ENST00000602530 724 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 OR4H6P-202ENST00000603819 340 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 PPATP2-201ENST00000605635 508 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AC144521.1-201ENST00000607148 956 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AL512506.1-201ENST00000613918 449 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AL122125.1-201ENST00000616999 600 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AP005431.1-201ENST00000618479 319 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 SMG1P7-201ENST00000565246 2704 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 NAMPTP1-201ENST00000440465 2514 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A1Q8WWI5 OR10AB1P-202ENST00000641219 1686 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 MIR375-201ENST00000362103 64 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 CCNB2P1-201ENST00000399411 1150 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 GAPDHP42-201ENST00000406848 981 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC245060.4-201ENST00000413293 1121 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 RAB9AP4-201ENST00000415230 609 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 NPM1P26-201ENST00000426339 738 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 ARL5AP3-201ENST00000439327 386 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms