Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
VPS8Q8N3P4 AC068790.7-201ENST00000602347 528 ntBASIC7.82□□□□□ -1.16
VPS8Q8N3P4 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS8Q8N3P4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS8Q8N3P4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.82□□□□□ -1.16
VPS8Q8N3P4 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS8Q8N3P4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.82□□□□□ -1.16
VPS8Q8N3P4 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC7.82□□□□□ -1.16
VPS8Q8N3P4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 RNA5SP113-201ENST00000410486 84 ntBASIC7.81□□□□□ -1.16
VPS8Q8N3P4 RNA5SP345-201ENST00000410646 108 ntBASIC7.81□□□□□ -1.16
VPS8Q8N3P4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 AC004074.1-201ENST00000421810 1063 ntBASIC7.81□□□□□ -1.16
VPS8Q8N3P4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 AL031320.1-201ENST00000604177 357 ntBASIC7.81□□□□□ -1.16
VPS8Q8N3P4 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 ZNF652P1-201ENST00000442420 1309 ntBASIC7.81□□□□□ -1.16
VPS8Q8N3P4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.81□□□□□ -1.16
VPS8Q8N3P4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 AC068446.1-201ENST00000556425 1549 ntBASIC7.8□□□□□ -1.16
VPS8Q8N3P4 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 AC004158.1-201ENST00000564508 4319 ntBASIC7.8□□□□□ -1.16
VPS8Q8N3P4 AC103591.2-201ENST00000265259 766 ntBASIC7.8□□□□□ -1.16
VPS8Q8N3P4 U3.30-201ENST00000391308 210 ntBASIC7.8□□□□□ -1.16
VPS8Q8N3P4 Z97832.1-201ENST00000402490 328 ntBASIC7.8□□□□□ -1.16
VPS8Q8N3P4 AL021331.1-201ENST00000402817 582 ntBASIC7.8□□□□□ -1.16
VPS8Q8N3P4 RPL36AP15-201ENST00000444514 266 ntBASIC7.8□□□□□ -1.16
VPS8Q8N3P4 AURKAPS2-201ENST00000454983 333 ntBASIC7.8□□□□□ -1.16
VPS8Q8N3P4 AC128716.1-201ENST00000475129 166 ntBASIC7.8□□□□□ -1.16
VPS8Q8N3P4 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 BGLT3-201ENST00000564523 994 ntBASIC7.8□□□□□ -1.16
VPS8Q8N3P4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
VPS8Q8N3P4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 RNA5SP514-201ENST00000363717 111 ntBASIC7.79□□□□□ -1.16
VPS8Q8N3P4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 AC009506.2-201ENST00000420635 840 ntBASIC7.79□□□□□ -1.16
VPS8Q8N3P4 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 AL645937.3-201ENST00000453647 936 ntBASIC7.79□□□□□ -1.16
VPS8Q8N3P4 RPL23AP56-201ENST00000460778 453 ntBASIC7.79□□□□□ -1.16
VPS8Q8N3P4 AC108751.3-201ENST00000461814 1020 ntBASIC7.79□□□□□ -1.16
VPS8Q8N3P4 COX6B1P2-201ENST00000489624 230 ntBASIC7.79□□□□□ -1.16
VPS8Q8N3P4 AC026688.1-201ENST00000520639 1168 ntBASIC7.79□□□□□ -1.16
VPS8Q8N3P4 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 PCNPP1-201ENST00000552501 511 ntBASIC7.79□□□□□ -1.16
VPS8Q8N3P4 MIR3934-201ENST00000579806 107 ntBASIC7.79□□□□□ -1.16
VPS8Q8N3P4 AC005084.1-201ENST00000605160 304 ntBASIC7.79□□□□□ -1.16
VPS8Q8N3P4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 AC011447.7-201ENST00000624228 1590 ntBASIC7.79□□□□□ -1.16
VPS8Q8N3P4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
VPS8Q8N3P4 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 AC013442.1-201ENST00000397347 228 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 RPL10P10-201ENST00000403509 664 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 TBCAP2-201ENST00000416175 326 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms