Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 SPATA2P1-201ENST00000431223 2055 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 RNU4-7P-201ENST00000364758 141 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 RN7SKP6-201ENST00000364795 319 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 MIR551A-201ENST00000385042 96 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 SNORA79B-201ENST00000410557 148 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 Z68694.1-201ENST00000413929 841 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AC079809.1-201ENST00000415468 276 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 MARK2P12-201ENST00000420129 585 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 MTND4LP7-201ENST00000431728 294 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 NPM1P19-201ENST00000450070 712 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 RN7SL197P-201ENST00000466981 299 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AL133445.1-201ENST00000467051 452 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 RN7SL547P-201ENST00000490793 290 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AC090638.1-201ENST00000498296 909 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AC109635.6-201ENST00000525487 1113 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 SNX6P1-201ENST00000601728 1224 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 IMMP1LP3-201ENST00000604197 224 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AL135786.2-201ENST00000608422 615 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 MIR6826-201ENST00000617808 98 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AC073592.7-201ENST00000623659 507 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AC132825.1-201ENST00000463573 2247 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 AC002525.1-201ENST00000624392 1622 ntBASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 CASC19-281ENST00000642118 1554 ntBASIC5.84□□□□□ -1.48
SNX30Q5VWJ9 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
SNX30Q5VWJ9 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SNX30Q5VWJ9 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 RNA5SP183-201ENST00000362452 119 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 RNA5SP319-201ENST00000362768 119 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 AL009179.1-201ENST00000406085 265 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 AC007161.1-204ENST00000423039 460 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 HMGN2P27-201ENST00000427352 270 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 AC023271.1-201ENST00000445936 1090 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 AC069277.2-201ENST00000454211 432 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 RN7SL214P-201ENST00000487317 265 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 RPSAP51-201ENST00000497462 645 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 GLUD1P3-202ENST00000508551 200 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 SETP12-201ENST00000514068 805 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 AC138832.1-201ENST00000522871 556 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 AC137627.1-201ENST00000545761 289 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 AC084373.1-201ENST00000603311 235 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 SUGT1P3-202ENST00000604259 383 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 AC135803.1-201ENST00000608748 565 ntBASIC5.83□□□□□ -1.48
SNX30Q5VWJ9 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms