Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AC022795.1-201ENST00000473808 480 ntBASIC4.41□□□□□ -1.7
USF2Q15853 RN7SL193P-201ENST00000491708 276 ntBASIC4.41□□□□□ -1.7
USF2Q15853 AC139365.2-201ENST00000517972 253 ntBASIC4.41□□□□□ -1.7
USF2Q15853 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.41□□□□□ -1.7
USF2Q15853 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.41□□□□□ -1.7
USF2Q15853 NPM1P35-201ENST00000533043 868 ntBASIC4.41□□□□□ -1.7
USF2Q15853 AC137627.1-201ENST00000545761 289 ntBASIC4.41□□□□□ -1.7
USF2Q15853 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USF2Q15853 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.41□□□□□ -1.7
USF2Q15853 AC007956.1-201ENST00000555623 542 ntBASIC4.41□□□□□ -1.7
USF2Q15853 AC006530.1-201ENST00000555980 571 ntBASIC4.41□□□□□ -1.7
USF2Q15853 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.41□□□□□ -1.7
USF2Q15853 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.41□□□□□ -1.7
USF2Q15853 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.41□□□□□ -1.7
USF2Q15853 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.41□□□□□ -1.7
USF2Q15853 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
USF2Q15853 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.41□□□□□ -1.7
USF2Q15853 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.41□□□□□ -1.7
USF2Q15853 AC015722.2-201ENST00000622210 551 ntBASIC4.41□□□□□ -1.7
USF2Q15853 AP006248.2-201ENST00000623309 592 ntBASIC4.41□□□□□ -1.7
USF2Q15853 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USF2Q15853 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USF2Q15853 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.41□□□□□ -1.7
USF2Q15853 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.41□□□□□ -1.7
USF2Q15853 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USF2Q15853 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USF2Q15853 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USF2Q15853 PDZK1P1-202ENST00000425209 1350 ntBASIC4.4□□□□□ -1.7
USF2Q15853 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.4□□□□□ -1.7
USF2Q15853 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.4□□□□□ -1.7
USF2Q15853 CYP1D1P-201ENST00000416662 1433 ntBASIC4.4□□□□□ -1.7
USF2Q15853 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
USF2Q15853 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.4□□□□□ -1.7
USF2Q15853 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.4□□□□□ -1.71
USF2Q15853 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USF2Q15853 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USF2Q15853 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USF2Q15853 COX6B1P3-201ENST00000312310 260 ntBASIC4.4□□□□□ -1.71
USF2Q15853 AC017079.1-201ENST00000333650 415 ntBASIC4.4□□□□□ -1.71
USF2Q15853 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USF2Q15853 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.4□□□□□ -1.71
USF2Q15853 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.4□□□□□ -1.71
USF2Q15853 RNA5SP326-201ENST00000363209 110 ntBASIC4.4□□□□□ -1.71
USF2Q15853 RNU6-984P-201ENST00000363236 109 ntBASIC4.4□□□□□ -1.71
USF2Q15853 RNA5SP500-201ENST00000364486 119 ntBASIC4.4□□□□□ -1.71
USF2Q15853 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USF2Q15853 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.4□□□□□ -1.71
USF2Q15853 RNU6-146P-201ENST00000384602 108 ntBASIC4.4□□□□□ -1.71
USF2Q15853 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
USF2Q15853 U3.28-201ENST00000391249 210 ntBASIC4.4□□□□□ -1.71
USF2Q15853 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USF2Q15853 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.4□□□□□ -1.71
USF2Q15853 AC096921.1-201ENST00000411661 375 ntBASIC4.4□□□□□ -1.71
USF2Q15853 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.4□□□□□ -1.71
USF2Q15853 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.4□□□□□ -1.71
USF2Q15853 MRPL53P1-201ENST00000414323 319 ntBASIC4.4□□□□□ -1.71
USF2Q15853 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.4□□□□□ -1.71
USF2Q15853 AC019050.1-201ENST00000418508 492 ntBASIC4.4□□□□□ -1.71
USF2Q15853 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.4□□□□□ -1.71
USF2Q15853 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.4□□□□□ -1.71
USF2Q15853 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.4□□□□□ -1.71
USF2Q15853 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.4□□□□□ -1.71
USF2Q15853 AC126120.1-201ENST00000431082 470 ntBASIC4.4□□□□□ -1.71
USF2Q15853 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.4□□□□□ -1.71
USF2Q15853 IFNWP4-201ENST00000453148 294 ntBASIC4.4□□□□□ -1.71
USF2Q15853 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.4□□□□□ -1.71
USF2Q15853 RPL5P30-201ENST00000465511 891 ntBASIC4.4□□□□□ -1.71
USF2Q15853 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.4□□□□□ -1.71
USF2Q15853 AL122020.1-201ENST00000472287 459 ntBASIC4.4□□□□□ -1.71
USF2Q15853 RN7SL170P-201ENST00000487098 295 ntBASIC4.4□□□□□ -1.71
USF2Q15853 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.4□□□□□ -1.71
USF2Q15853 AC090638.1-201ENST00000498296 909 ntBASIC4.4□□□□□ -1.71
USF2Q15853 RBBP4P1-201ENST00000502424 1276 ntBASIC4.4□□□□□ -1.71
USF2Q15853 MYL12BP2-201ENST00000503948 512 ntBASIC4.4□□□□□ -1.71
USF2Q15853 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.4□□□□□ -1.71
USF2Q15853 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.4□□□□□ -1.71
USF2Q15853 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.4□□□□□ -1.71
USF2Q15853 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.4□□□□□ -1.71
USF2Q15853 AC074255.1-201ENST00000511259 501 ntBASIC4.4□□□□□ -1.71
USF2Q15853 RNU6-941P-201ENST00000516346 108 ntBASIC4.4□□□□□ -1.71
USF2Q15853 RNA5SP473-201ENST00000516402 125 ntBASIC4.4□□□□□ -1.71
USF2Q15853 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.4□□□□□ -1.71
USF2Q15853 AC011853.1-201ENST00000518911 454 ntBASIC4.4□□□□□ -1.71
USF2Q15853 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.4□□□□□ -1.71
USF2Q15853 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.4□□□□□ -1.71
USF2Q15853 OR4A17P-201ENST00000526032 904 ntBASIC4.4□□□□□ -1.71
USF2Q15853 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.4□□□□□ -1.71
USF2Q15853 PCNAP4-201ENST00000532690 730 ntBASIC4.4□□□□□ -1.71
USF2Q15853 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.4□□□□□ -1.71
USF2Q15853 AC084121.1-201ENST00000533882 835 ntBASIC4.4□□□□□ -1.71
USF2Q15853 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.4□□□□□ -1.71
USF2Q15853 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.4□□□□□ -1.71
USF2Q15853 AL845552.1-201ENST00000556820 323 ntBASIC4.4□□□□□ -1.71
USF2Q15853 AL356801.1-201ENST00000559320 294 ntBASIC4.4□□□□□ -1.71
USF2Q15853 AC096996.1-201ENST00000563813 325 ntBASIC4.4□□□□□ -1.71
USF2Q15853 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.4□□□□□ -1.71
USF2Q15853 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.4□□□□□ -1.71
USF2Q15853 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.4□□□□□ -1.71
USF2Q15853 AC002310.3-201ENST00000569728 723 ntBASIC4.4□□□□□ -1.71
USF2Q15853 DHFRP1-201ENST00000579682 559 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms