Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RPS4XP5-202ENST00000449995 1334 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 KYNUP2-201ENST00000582280 1329 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH1Q08174 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH1Q08174 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC083806.2-201ENST00000617795 2685 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDH1Q08174 AP002001.2-201ENST00000529025 1469 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
PCDH1Q08174 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 MTND5P17-201ENST00000418405 1603 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDH1Q08174 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PCDH1Q08174 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
PCDH1Q08174 NAMPTP1-201ENST00000440465 2514 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PCDH1Q08174 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PCDH1Q08174 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PCDH1Q08174 RN7SKP55-201ENST00000364888 307 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 SNORA70.5-201ENST00000365519 135 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH1Q08174 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 Y_RNA.450-201ENST00000384198 113 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 RPL36P18-201ENST00000419316 318 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH1Q08174 AL139413.1-201ENST00000421309 217 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 AC134879.1-201ENST00000426062 394 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 OFD1P12Y-201ENST00000427963 1207 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PCDH1Q08174 MTCO2P11-201ENST00000431069 680 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 RPL7P29-201ENST00000437151 728 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH1Q08174 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH1Q08174 AC011742.2-201ENST00000443818 352 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH1Q08174 AC239367.2-201ENST00000447309 705 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 COX6CP18-201ENST00000448769 222 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 AL354714.5-201ENST00000450131 590 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH1Q08174 ARPC3P2-201ENST00000457786 533 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 PSMC1P13-201ENST00000458195 985 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 RN7SL149P-201ENST00000465197 281 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 AC090013.1-201ENST00000485147 480 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDH1Q08174 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH1Q08174 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDH1Q08174 OR10J9P-201ENST00000511932 987 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDH1Q08174 RN7SKP242-201ENST00000515967 289 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.73□□□□□ -1.33
PCDH1Q08174 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDH1Q08174 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDH1Q08174 MIR1273F-201ENST00000580581 99 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 RN7SL657P-201ENST00000582431 293 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 RN7SL697P-201ENST00000582484 299 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.73□□□□□ -1.33
PCDH1Q08174 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH1Q08174 AC020914.6-201ENST00000594327 272 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDH1Q08174 AP000907.4-201ENST00000604143 237 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 AC098614.4-201ENST00000607601 462 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 AC138649.3-201ENST00000622154 254 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 FAM157B-203ENST00000639350 358 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 AL356585.10-201ENST00000641883 123 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
PCDH1Q08174 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH1Q08174 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 AC011447.7-201ENST00000624228 1590 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH1Q08174 AL359091.1-201ENST00000449048 1734 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 HSPD1P1-201ENST00000503199 1726 ntBASIC6.73□□□□□ -1.33
PCDH1Q08174 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
PCDH1Q08174 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH1Q08174 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH1Q08174 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDH1Q08174 MTND4P12-201ENST00000498999 1377 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
PCDH1Q08174 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms