Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RRM2P4-201ENST00000441721 562 ntBASIC3.03□□□□□ -1.92
HSPG2P98160 AC106782.4-201ENST00000568264 210 ntBASIC3.03□□□□□ -1.92
HSPG2P98160 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.03□□□□□ -1.92
HSPG2P98160 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.03□□□□□ -1.92
HSPG2P98160 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HSPG2P98160 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
HSPG2P98160 AL355596.1-201ENST00000565399 3996 ntBASIC3.03□□□□□ -1.92
HSPG2P98160 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.92
HSPG2P98160 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC3.03□□□□□ -1.92
HSPG2P98160 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
HSPG2P98160 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC3.03□□□□□ -1.93
HSPG2P98160 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
HSPG2P98160 ARL4AP5-201ENST00000404372 599 ntBASIC3.03□□□□□ -1.93
HSPG2P98160 OR7E125P-201ENST00000443450 846 ntBASIC3.03□□□□□ -1.93
HSPG2P98160 AC108475.1-201ENST00000507880 950 ntBASIC3.03□□□□□ -1.93
HSPG2P98160 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.03□□□□□ -1.93
HSPG2P98160 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.03□□□□□ -1.93
HSPG2P98160 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.03□□□□□ -1.93
HSPG2P98160 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.03□□□□□ -1.93
HSPG2P98160 AC022726.1-201ENST00000587475 207 ntBASIC3.03□□□□□ -1.93
HSPG2P98160 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.03□□□□□ -1.93
HSPG2P98160 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.03□□□□□ -1.93
HSPG2P98160 VN1R92P-201ENST00000598511 928 ntBASIC3.03□□□□□ -1.93
HSPG2P98160 AL121932.1-201ENST00000605542 214 ntBASIC3.03□□□□□ -1.93
HSPG2P98160 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HSPG2P98160 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.02□□□□□ -1.93
HSPG2P98160 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
HSPG2P98160 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 HSFY1P1-201ENST00000423928 1178 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 BX323845.1-201ENST00000432417 179 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 SLC25A18P1-201ENST00000449385 454 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 AL162591.2-201ENST00000449634 317 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 NOL8P1-201ENST00000508336 3529 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 AC108064.1-201ENST00000513791 460 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 AC010476.1-201ENST00000519111 851 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC3.02□□□□□ -1.93
HSPG2P98160 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 RN7SL802P-201ENST00000577858 299 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 MIR4420-201ENST00000583944 77 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 AL442639.1-201ENST00000625030 1899 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.02□□□□□ -1.93
HSPG2P98160 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 AL590762.2-201ENST00000395798 571 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC3.02□□□□□ -1.93
HSPG2P98160 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.02□□□□□ -1.93
HSPG2P98160 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 MIR6875-201ENST00000617506 72 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 AC005858.4-201ENST00000623191 700 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 MIR492-201ENST00000638676 116 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC3.02□□□□□ -1.93
HSPG2P98160 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 STK3-216ENST00000523601 3107 ntTSL 2 BASIC3.02□□□□□ -1.93
HSPG2P98160 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.02□□□□□ -1.93
HSPG2P98160 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC3.02□□□□□ -1.93
HSPG2P98160 RNA5SP372-201ENST00000390836 115 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 UQCRHP4-201ENST00000471686 272 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 AC130364.2-201ENST00000528639 604 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 AC023043.4-201ENST00000612081 449 ntBASIC3.02□□□□□ -1.93
HSPG2P98160 UGP2-232ENST00000640075 567 ntTSL 5 BASIC3.02□□□□□ -1.93
HSPG2P98160 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HSPG2P98160 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms