Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TPM4P67936 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TPM4P67936 AC067773.1-201ENST00000603284 1094 ntBASIC5.73□□□□□ -1.49
TPM4P67936 AC025262.3-201ENST00000623666 360 ntBASIC5.73□□□□□ -1.49
TPM4P67936 AC016542.2-201ENST00000624201 619 ntBASIC5.73□□□□□ -1.49
TPM4P67936 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM4P67936 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
TPM4P67936 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TPM4P67936 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM4P67936 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TPM4P67936 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TPM4P67936 RBPJP2-201ENST00000618187 1444 ntBASIC5.73□□□□□ -1.49
TPM4P67936 AC092747.4-201ENST00000620519 1861 ntBASIC5.73□□□□□ -1.49
TPM4P67936 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TPM4P67936 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM4P67936 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TPM4P67936 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TPM4P67936 RNA5SP90-201ENST00000364801 99 ntBASIC5.72□□□□□ -1.49
TPM4P67936 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM4P67936 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TPM4P67936 RNA5SP122-201ENST00000384457 108 ntBASIC5.72□□□□□ -1.49
TPM4P67936 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM4P67936 Z68694.1-201ENST00000413929 841 ntBASIC5.72□□□□□ -1.49
TPM4P67936 OR6E1P-201ENST00000414424 923 ntBASIC5.72□□□□□ -1.49
TPM4P67936 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM4P67936 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TPM4P67936 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM4P67936 AL356981.1-201ENST00000454879 684 ntBASIC5.72□□□□□ -1.49
TPM4P67936 AP000942.1-201ENST00000463969 747 ntBASIC5.72□□□□□ -1.49
TPM4P67936 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.72□□□□□ -1.49
TPM4P67936 AP002884.1-201ENST00000479691 655 ntBASIC5.72□□□□□ -1.49
TPM4P67936 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
TPM4P67936 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TPM4P67936 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM4P67936 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.72□□□□□ -1.49
TPM4P67936 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.72□□□□□ -1.49
TPM4P67936 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.72□□□□□ -1.49
TPM4P67936 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.72□□□□□ -1.49
TPM4P67936 ARGFXP2-201ENST00000579304 949 ntBASIC5.72□□□□□ -1.49
TPM4P67936 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.72□□□□□ -1.49
TPM4P67936 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
TPM4P67936 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.72□□□□□ -1.49
TPM4P67936 AL359091.2-201ENST00000609303 556 ntBASIC5.72□□□□□ -1.49
TPM4P67936 MIR8069-1-201ENST00000616627 86 ntBASIC5.72□□□□□ -1.49
TPM4P67936 MIR8069-2-201ENST00000621412 86 ntBASIC5.72□□□□□ -1.49
TPM4P67936 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM4P67936 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM4P67936 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM4P67936 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TPM4P67936 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TPM4P67936 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
TPM4P67936 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.72□□□□□ -1.49
TPM4P67936 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
TPM4P67936 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TPM4P67936 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.72□□□□□ -1.49
TPM4P67936 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
TPM4P67936 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TPM4P67936 AC023490.2-201ENST00000359859 470 ntBASIC5.71□□□□□ -1.5
TPM4P67936 MIR133B-201ENST00000362210 119 ntBASIC5.71□□□□□ -1.5
TPM4P67936 RNA5SP433-201ENST00000364491 114 ntBASIC5.71□□□□□ -1.5
TPM4P67936 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TPM4P67936 AC093155.2-201ENST00000420734 937 ntBASIC5.71□□□□□ -1.5
TPM4P67936 DSTNP5-201ENST00000427921 523 ntBASIC5.71□□□□□ -1.5
TPM4P67936 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.71□□□□□ -1.5
TPM4P67936 CLNS1AP1-201ENST00000435954 682 ntBASIC5.71□□□□□ -1.5
TPM4P67936 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.71□□□□□ -1.5
TPM4P67936 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.71□□□□□ -1.5
TPM4P67936 AC011225.1-201ENST00000457751 369 ntBASIC5.71□□□□□ -1.5
TPM4P67936 CYCSP34-201ENST00000458172 304 ntBASIC5.71□□□□□ -1.5
TPM4P67936 OR11I1P-201ENST00000486033 954 ntBASIC5.71□□□□□ -1.5
TPM4P67936 RPL23AP53-201ENST00000521854 457 ntBASIC5.71□□□□□ -1.5
TPM4P67936 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.71□□□□□ -1.5
TPM4P67936 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TPM4P67936 BLZF2P-201ENST00000553776 1130 ntBASIC5.71□□□□□ -1.5
TPM4P67936 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.71□□□□□ -1.5
TPM4P67936 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.71□□□□□ -1.5
TPM4P67936 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.71□□□□□ -1.5
TPM4P67936 AC015720.2-201ENST00000567709 334 ntBASIC5.71□□□□□ -1.5
TPM4P67936 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.71□□□□□ -1.5
TPM4P67936 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.71□□□□□ -1.5
TPM4P67936 AC135068.12-201ENST00000637370 931 ntBASIC5.71□□□□□ -1.5
TPM4P67936 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TPM4P67936 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TPM4P67936 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TPM4P67936 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.71□□□□□ -1.5
TPM4P67936 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TPM4P67936 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TPM4P67936 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.7□□□□□ -1.5
TPM4P67936 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
TPM4P67936 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.7□□□□□ -1.5
TPM4P67936 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.7□□□□□ -1.5
TPM4P67936 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM4P67936 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TPM4P67936 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TPM4P67936 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TPM4P67936 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TPM4P67936 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TPM4P67936 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TPM4P67936 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TPM4P67936 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms