Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLRN1P58418 GSTA8P-201ENST00000404253 637 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 AL078595.1-201ENST00000404458 226 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.56□□□□□ -1.52
CLRN1P58418 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.56□□□□□ -1.52
CLRN1P58418 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.56□□□□□ -1.52
CLRN1P58418 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.56□□□□□ -1.52
CLRN1P58418 MTCO2P16-201ENST00000436962 677 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 ELOCP8-201ENST00000439309 332 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.56□□□□□ -1.52
CLRN1P58418 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.56□□□□□ -1.52
CLRN1P58418 ELOCP15-201ENST00000442090 332 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 AC009961.3-201ENST00000449832 765 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.56□□□□□ -1.52
CLRN1P58418 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLRN1P58418 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 AC002075.1-201ENST00000457396 676 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 AC011979.1-201ENST00000472300 483 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 SYPL1P1-201ENST00000473622 768 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 RPL23AP37-201ENST00000479658 549 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 AC098583.1-201ENST00000480875 255 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.56□□□□□ -1.52
CLRN1P58418 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.56□□□□□ -1.52
CLRN1P58418 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.56□□□□□ -1.52
CLRN1P58418 RNU6-1004P-201ENST00000516584 111 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.56□□□□□ -1.52
CLRN1P58418 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.56□□□□□ -1.52
CLRN1P58418 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLRN1P58418 RPA2P3-201ENST00000533268 770 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.56□□□□□ -1.52
CLRN1P58418 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.56□□□□□ -1.52
CLRN1P58418 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLRN1P58418 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.56□□□□□ -1.52
CLRN1P58418 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.56□□□□□ -1.52
CLRN1P58418 MIR3189-201ENST00000578735 73 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.56□□□□□ -1.52
CLRN1P58418 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.56□□□□□ -1.52
CLRN1P58418 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLRN1P58418 DYNLL1P1-201ENST00000595442 269 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.56□□□□□ -1.52
CLRN1P58418 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.56□□□□□ -1.52
CLRN1P58418 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLRN1P58418 AC122133.1-201ENST00000613964 233 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 AC005899.6-201ENST00000620729 297 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 AL138693.1-201ENST00000622219 129 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 Z69908.1-201ENST00000622603 247 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 AL122023.1-201ENST00000622847 530 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.56□□□□□ -1.52
CLRN1P58418 AC003992.1-201ENST00000635364 557 ntBASIC5.56□□□□□ -1.52
CLRN1P58418 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.56□□□□□ -1.52
CLRN1P58418 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLRN1P58418 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLRN1P58418 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.56□□□□□ -1.52
CLRN1P58418 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.56□□□□□ -1.52
CLRN1P58418 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLRN1P58418 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLRN1P58418 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLRN1P58418 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.55□□□□□ -1.52
CLRN1P58418 AC027279.4-201ENST00000624371 2072 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.55□□□□□ -1.52
CLRN1P58418 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 CASC19-281ENST00000642118 1554 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CLRN1P58418 PSG10P-201ENST00000501199 1500 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.55□□□□□ -1.52
CLRN1P58418 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.55□□□□□ -1.52
CLRN1P58418 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CLRN1P58418 ENSAP3-201ENST00000312710 333 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 RN7SKP184-201ENST00000362348 333 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 Y_RNA.192-201ENST00000363977 102 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CLRN1P58418 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.55□□□□□ -1.52
CLRN1P58418 AP000357.1-201ENST00000409926 1165 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 RNU6-648P-201ENST00000410190 107 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.55□□□□□ -1.52
CLRN1P58418 AC004074.1-201ENST00000421810 1063 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.55□□□□□ -1.52
CLRN1P58418 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.55□□□□□ -1.52
CLRN1P58418 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.55□□□□□ -1.52
CLRN1P58418 RPL21P43-201ENST00000425440 472 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.55□□□□□ -1.52
CLRN1P58418 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.55□□□□□ -1.52
CLRN1P58418 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.55□□□□□ -1.52
CLRN1P58418 AC112492.2-201ENST00000432774 1030 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.55□□□□□ -1.52
CLRN1P58418 YWHAZP7-201ENST00000436906 631 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AL138878.2-201ENST00000440581 1241 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AC002542.1-201ENST00000440683 193 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AC239798.3-201ENST00000454459 408 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AC099670.1-201ENST00000455141 783 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AL109741.2-201ENST00000455561 343 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms