Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MIR7853-201ENST00000584820 132 ntBASIC5.03□□□□□ -1.6
VSX2P58304 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.03□□□□□ -1.6
VSX2P58304 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.03□□□□□ -1.6
VSX2P58304 AC090527.3-201ENST00000619041 548 ntBASIC5.03□□□□□ -1.6
VSX2P58304 SAMMSON-227ENST00000642114 1199 ntBASIC5.03□□□□□ -1.6
VSX2P58304 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
VSX2P58304 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VSX2P58304 ZNF733P-202ENST00000444809 1573 ntBASIC5.03□□□□□ -1.6
VSX2P58304 AL022322.2-201ENST00000624072 20397 ntBASIC5.03□□□□□ -1.6
VSX2P58304 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.02□□□□□ -1.61
VSX2P58304 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VSX2P58304 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.02□□□□□ -1.61
VSX2P58304 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.02□□□□□ -1.61
VSX2P58304 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.02□□□□□ -1.61
VSX2P58304 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VSX2P58304 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
VSX2P58304 SCARNA15-201ENST00000607520 4325 ntBASIC5.02□□□□□ -1.61
VSX2P58304 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.02□□□□□ -1.61
VSX2P58304 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VSX2P58304 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.02□□□□□ -1.61
VSX2P58304 RNU1-146P-201ENST00000364015 165 ntBASIC5.02□□□□□ -1.61
VSX2P58304 MIR600-201ENST00000385007 98 ntBASIC5.02□□□□□ -1.61
VSX2P58304 EI24P3-201ENST00000399046 1062 ntBASIC5.02□□□□□ -1.61
VSX2P58304 SPTLC1P2-201ENST00000407089 121 ntBASIC5.02□□□□□ -1.61
VSX2P58304 RNU6-233P-201ENST00000410845 141 ntBASIC5.02□□□□□ -1.61
VSX2P58304 RN7SKP273-201ENST00000411392 314 ntBASIC5.02□□□□□ -1.61
VSX2P58304 AC017019.1-201ENST00000426129 261 ntBASIC5.02□□□□□ -1.61
VSX2P58304 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.02□□□□□ -1.61
VSX2P58304 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.02□□□□□ -1.61
VSX2P58304 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.02□□□□□ -1.61
VSX2P58304 AL389915.2-201ENST00000454576 441 ntBASIC5.02□□□□□ -1.61
VSX2P58304 AC017007.3-201ENST00000479865 435 ntBASIC5.02□□□□□ -1.61
VSX2P58304 AC004815.1-201ENST00000484185 331 ntBASIC5.02□□□□□ -1.61
VSX2P58304 OR5M14P-201ENST00000506803 618 ntBASIC5.02□□□□□ -1.61
VSX2P58304 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VSX2P58304 FTH1P11-201ENST00000517577 551 ntBASIC5.02□□□□□ -1.61
VSX2P58304 AC012400.1-201ENST00000518452 381 ntBASIC5.02□□□□□ -1.61
VSX2P58304 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.02□□□□□ -1.61
VSX2P58304 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.02□□□□□ -1.61
VSX2P58304 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.02□□□□□ -1.61
VSX2P58304 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.02□□□□□ -1.61
VSX2P58304 AC093591.2-201ENST00000565254 3843 ntBASIC5.02□□□□□ -1.61
VSX2P58304 MIR3691-201ENST00000578066 90 ntBASIC5.02□□□□□ -1.61
VSX2P58304 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.02□□□□□ -1.61
VSX2P58304 AC095055.1-201ENST00000603472 1113 ntBASIC5.02□□□□□ -1.61
VSX2P58304 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.02□□□□□ -1.61
VSX2P58304 AC010632.3-201ENST00000611377 369 ntBASIC5.02□□□□□ -1.61
VSX2P58304 AL121612.2-201ENST00000612261 482 ntBASIC5.02□□□□□ -1.61
VSX2P58304 AC016769.4-201ENST00000616893 535 ntBASIC5.02□□□□□ -1.61
VSX2P58304 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VSX2P58304 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VSX2P58304 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VSX2P58304 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.02□□□□□ -1.61
VSX2P58304 AL603750.1-201ENST00000624216 1717 ntBASIC5.02□□□□□ -1.61
VSX2P58304 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
VSX2P58304 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VSX2P58304 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VSX2P58304 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VSX2P58304 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VSX2P58304 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
VSX2P58304 MUC2-202ENST00000613187 4845 ntBASIC5.02□□□□□ -1.61
VSX2P58304 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VSX2P58304 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VSX2P58304 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VSX2P58304 AC092376.2-201ENST00000622621 4116 ntBASIC5.01□□□□□ -1.61
VSX2P58304 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
VSX2P58304 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.01□□□□□ -1.61
VSX2P58304 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.01□□□□□ -1.61
VSX2P58304 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VSX2P58304 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
VSX2P58304 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
VSX2P58304 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VSX2P58304 OR9G4-201ENST00000302957 984 ntBASIC5.01□□□□□ -1.61
VSX2P58304 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
VSX2P58304 SNORA17.1-201ENST00000362945 126 ntBASIC5.01□□□□□ -1.61
VSX2P58304 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.01□□□□□ -1.61
VSX2P58304 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VSX2P58304 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VSX2P58304 HYALP1-201ENST00000417674 1279 ntBASIC5.01□□□□□ -1.61
VSX2P58304 AL121878.1-201ENST00000418638 859 ntBASIC5.01□□□□□ -1.61
VSX2P58304 AC005033.1-201ENST00000428904 813 ntBASIC5.01□□□□□ -1.61
VSX2P58304 AC124944.2-201ENST00000429866 1242 ntBASIC5.01□□□□□ -1.61
VSX2P58304 AC090018.1-201ENST00000434369 367 ntBASIC5.01□□□□□ -1.61
VSX2P58304 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.01□□□□□ -1.61
VSX2P58304 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VSX2P58304 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.01□□□□□ -1.61
VSX2P58304 RN7SL515P-201ENST00000463999 297 ntBASIC5.01□□□□□ -1.61
VSX2P58304 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.01□□□□□ -1.61
VSX2P58304 RPL7P41-201ENST00000485823 957 ntBASIC5.01□□□□□ -1.61
VSX2P58304 AC093763.2-201ENST00000505334 1223 ntBASIC5.01□□□□□ -1.61
VSX2P58304 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.01□□□□□ -1.61
VSX2P58304 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
VSX2P58304 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.01□□□□□ -1.61
VSX2P58304 AC024940.3-201ENST00000538551 316 ntBASIC5.01□□□□□ -1.61
VSX2P58304 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.01□□□□□ -1.61
VSX2P58304 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
VSX2P58304 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
VSX2P58304 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VSX2P58304 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VSX2P58304 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms