Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC3.92□□□□□ -1.78
CMC4P56277 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CMC4P56277 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CMC4P56277 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CMC4P56277 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC3.92□□□□□ -1.78
CMC4P56277 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CMC4P56277 MTND5P23-201ENST00000430812 1655 ntBASIC3.92□□□□□ -1.78
CMC4P56277 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CMC4P56277 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CMC4P56277 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CMC4P56277 RNA5SP90-201ENST00000364801 99 ntBASIC3.92□□□□□ -1.78
CMC4P56277 AC007618.1-201ENST00000366455 732 ntBASIC3.92□□□□□ -1.78
CMC4P56277 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CMC4P56277 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CMC4P56277 SSX3-202ENST00000376893 800 ntTSL 2 BASIC3.92□□□□□ -1.78
CMC4P56277 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CMC4P56277 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.92□□□□□ -1.78
CMC4P56277 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC3.92□□□□□ -1.78
CMC4P56277 AL355433.1-201ENST00000422804 300 ntBASIC3.92□□□□□ -1.78
CMC4P56277 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.92□□□□□ -1.78
CMC4P56277 RPL5P2-201ENST00000429598 854 ntBASIC3.92□□□□□ -1.78
CMC4P56277 AC009238.2-201ENST00000431026 355 ntBASIC3.92□□□□□ -1.78
CMC4P56277 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC3.92□□□□□ -1.78
CMC4P56277 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CMC4P56277 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.92□□□□□ -1.78
CMC4P56277 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.92□□□□□ -1.78
CMC4P56277 AC108751.3-201ENST00000461814 1020 ntBASIC3.92□□□□□ -1.78
CMC4P56277 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.92□□□□□ -1.78
CMC4P56277 AC074386.1-201ENST00000476560 767 ntBASIC3.92□□□□□ -1.78
CMC4P56277 AC058823.1-201ENST00000485315 474 ntBASIC3.92□□□□□ -1.78
CMC4P56277 RPL7P41-201ENST00000485823 957 ntBASIC3.92□□□□□ -1.78
CMC4P56277 PGAM1P13-201ENST00000507497 754 ntBASIC3.92□□□□□ -1.78
CMC4P56277 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.92□□□□□ -1.78
CMC4P56277 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.92□□□□□ -1.78
CMC4P56277 RNU6-941P-201ENST00000516346 108 ntBASIC3.92□□□□□ -1.78
CMC4P56277 SCARNA21.2-201ENST00000516600 166 ntBASIC3.92□□□□□ -1.78
CMC4P56277 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.92□□□□□ -1.78
CMC4P56277 AC130364.2-201ENST00000528639 604 ntBASIC3.92□□□□□ -1.78
CMC4P56277 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC3.92□□□□□ -1.78
CMC4P56277 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.92□□□□□ -1.78
CMC4P56277 RPL10P14-201ENST00000565265 298 ntBASIC3.92□□□□□ -1.78
CMC4P56277 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.92□□□□□ -1.78
CMC4P56277 RBM22P1-201ENST00000578589 1214 ntBASIC3.92□□□□□ -1.78
CMC4P56277 VN1R81P-201ENST00000602085 372 ntBASIC3.92□□□□□ -1.78
CMC4P56277 AP000894.4-201ENST00000610185 483 ntBASIC3.92□□□□□ -1.78
CMC4P56277 AC126915.2-201ENST00000610957 190 ntBASIC3.92□□□□□ -1.78
CMC4P56277 MIR6862-1-201ENST00000613016 70 ntBASIC3.92□□□□□ -1.78
CMC4P56277 MIR6862-2-201ENST00000614755 70 ntBASIC3.92□□□□□ -1.78
CMC4P56277 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.92□□□□□ -1.78
CMC4P56277 MIR6729-201ENST00000618194 65 ntBASIC3.92□□□□□ -1.78
CMC4P56277 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CMC4P56277 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CMC4P56277 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CMC4P56277 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC3.92□□□□□ -1.78
CMC4P56277 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CMC4P56277 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC3.92□□□□□ -1.78
CMC4P56277 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
CMC4P56277 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CMC4P56277 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CMC4P56277 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC3.92□□□□□ -1.78
CMC4P56277 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
CMC4P56277 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CMC4P56277 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CMC4P56277 FGG-205ENST00000407946 1636 ntTSL 5 BASIC3.92□□□□□ -1.78
CMC4P56277 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CMC4P56277 CASC19-221ENST00000641309 1382 ntBASIC3.91□□□□□ -1.78
CMC4P56277 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC3.91□□□□□ -1.78
CMC4P56277 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CMC4P56277 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CMC4P56277 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC3.91□□□□□ -1.78
CMC4P56277 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC3.91□□□□□ -1.78
CMC4P56277 AC017079.1-201ENST00000333650 415 ntBASIC3.91□□□□□ -1.78
CMC4P56277 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CMC4P56277 SNORA16A-201ENST00000384342 137 ntBASIC3.91□□□□□ -1.78
CMC4P56277 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CMC4P56277 RN7SKP229-201ENST00000410465 302 ntBASIC3.91□□□□□ -1.78
CMC4P56277 GABARAPL3-201ENST00000412799 354 ntBASIC3.91□□□□□ -1.78
CMC4P56277 RPL12P43-201ENST00000420608 499 ntBASIC3.91□□□□□ -1.78
CMC4P56277 AC009506.2-201ENST00000420635 840 ntBASIC3.91□□□□□ -1.78
CMC4P56277 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
CMC4P56277 AL354766.1-201ENST00000423396 542 ntBASIC3.91□□□□□ -1.78
CMC4P56277 HNRNPA1P29-201ENST00000426409 879 ntBASIC3.91□□□□□ -1.78
CMC4P56277 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC3.91□□□□□ -1.78
CMC4P56277 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC3.91□□□□□ -1.78
CMC4P56277 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC3.91□□□□□ -1.78
CMC4P56277 REG1CP-206ENST00000447469 496 ntBASIC3.91□□□□□ -1.78
CMC4P56277 MYO5BP2-201ENST00000449815 1277 ntBASIC3.91□□□□□ -1.78
CMC4P56277 TAAR4P-201ENST00000454843 1039 ntBASIC3.91□□□□□ -1.78
CMC4P56277 AC011225.1-201ENST00000457751 369 ntBASIC3.91□□□□□ -1.78
CMC4P56277 AC079841.1-201ENST00000481228 950 ntBASIC3.91□□□□□ -1.78
CMC4P56277 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.91□□□□□ -1.78
CMC4P56277 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CMC4P56277 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.91□□□□□ -1.78
CMC4P56277 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC3.91□□□□□ -1.78
CMC4P56277 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.91□□□□□ -1.78
CMC4P56277 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC3.91□□□□□ -1.78
CMC4P56277 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.91□□□□□ -1.78
CMC4P56277 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CMC4P56277 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC3.91□□□□□ -1.78
CMC4P56277 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms