Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH6P55285 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH6P55285 AC245028.2-201ENST00000458673 253 ntBASIC5.39□□□□□ -1.55
CDH6P55285 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CDH6P55285 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.39□□□□□ -1.55
CDH6P55285 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH6P55285 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH6P55285 AC127381.1-201ENST00000555979 939 ntBASIC5.39□□□□□ -1.55
CDH6P55285 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CDH6P55285 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH6P55285 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH6P55285 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH6P55285 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH6P55285 AC127024.5-201ENST00000580085 462 ntBASIC5.39□□□□□ -1.55
CDH6P55285 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH6P55285 BNIP3P35-201ENST00000604530 490 ntBASIC5.39□□□□□ -1.55
CDH6P55285 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH6P55285 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH6P55285 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH6P55285 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CDH6P55285 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH6P55285 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH6P55285 NAMPTP1-201ENST00000440465 2514 ntBASIC5.39□□□□□ -1.55
CDH6P55285 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH6P55285 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH6P55285 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CDH6P55285 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CDH6P55285 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CDH6P55285 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH6P55285 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CDH6P55285 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH6P55285 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH6P55285 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH6P55285 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH6P55285 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH6P55285 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH6P55285 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH6P55285 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH6P55285 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH6P55285 AL390316.1-201ENST00000406279 553 ntBASIC5.38□□□□□ -1.55
CDH6P55285 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH6P55285 SLC35E1P1-201ENST00000419313 864 ntBASIC5.38□□□□□ -1.55
CDH6P55285 EI24P4-201ENST00000423683 1078 ntBASIC5.38□□□□□ -1.55
CDH6P55285 AC108075.1-201ENST00000424692 529 ntBASIC5.38□□□□□ -1.55
CDH6P55285 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.38□□□□□ -1.55
CDH6P55285 NPM1P19-201ENST00000450070 712 ntBASIC5.38□□□□□ -1.55
CDH6P55285 Z92846.1-201ENST00000456203 268 ntBASIC5.38□□□□□ -1.55
CDH6P55285 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH6P55285 RPS4XP1-201ENST00000482189 787 ntBASIC5.38□□□□□ -1.55
CDH6P55285 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH6P55285 GTF2F2P1-201ENST00000511083 675 ntBASIC5.38□□□□□ -1.55
CDH6P55285 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH6P55285 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CDH6P55285 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH6P55285 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH6P55285 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH6P55285 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH6P55285 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH6P55285 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH6P55285 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH6P55285 MIR3176-201ENST00000582210 90 ntBASIC5.38□□□□□ -1.55
CDH6P55285 MIR4660-201ENST00000583549 74 ntBASIC5.38□□□□□ -1.55
CDH6P55285 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH6P55285 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH6P55285 AC010503.3-201ENST00000594355 540 ntBASIC5.38□□□□□ -1.55
CDH6P55285 AP000864.1-201ENST00000609424 650 ntBASIC5.38□□□□□ -1.55
CDH6P55285 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH6P55285 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH6P55285 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH6P55285 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH6P55285 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH6P55285 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH6P55285 AC135068.12-201ENST00000637370 931 ntBASIC5.38□□□□□ -1.55
CDH6P55285 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH6P55285 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CDH6P55285 AC063976.2-201ENST00000425667 3556 ntBASIC5.38□□□□□ -1.55
CDH6P55285 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH6P55285 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH6P55285 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH6P55285 AC104623.2-202ENST00000623477 4002 ntBASIC5.37□□□□□ -1.55
CDH6P55285 SCARNA15-201ENST00000607520 4325 ntBASIC5.37□□□□□ -1.55
CDH6P55285 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CDH6P55285 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH6P55285 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH6P55285 AC092642.1-201ENST00000392417 425 ntBASIC5.37□□□□□ -1.55
CDH6P55285 SNORA81-201ENST00000408493 178 ntBASIC5.37□□□□□ -1.55
CDH6P55285 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH6P55285 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH6P55285 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH6P55285 AC009238.2-201ENST00000431026 355 ntBASIC5.37□□□□□ -1.55
CDH6P55285 AC104849.1-201ENST00000462623 405 ntBASIC5.37□□□□□ -1.55
CDH6P55285 AC020779.1-201ENST00000478757 796 ntBASIC5.37□□□□□ -1.55
CDH6P55285 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH6P55285 OR2A3P-201ENST00000493774 953 ntBASIC5.37□□□□□ -1.55
CDH6P55285 AC097173.1-201ENST00000505862 819 ntBASIC5.37□□□□□ -1.55
CDH6P55285 PGAM1P13-201ENST00000507497 754 ntBASIC5.37□□□□□ -1.55
CDH6P55285 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH6P55285 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH6P55285 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH6P55285 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms