Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 HLA-DPA3-207ENST00000454398 229 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 CST12P-201ENST00000457644 362 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AC093770.1-201ENST00000511559 571 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 RN7SKP5-201ENST00000517045 272 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHB3P54753 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC6.5□□□□□ -1.37
EPHB3P54753 IGLVIV-64-201ENST00000518581 301 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.5□□□□□ -1.37
EPHB3P54753 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.5□□□□□ -1.37
EPHB3P54753 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC6.5□□□□□ -1.37
EPHB3P54753 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.5□□□□□ -1.37
EPHB3P54753 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHB3P54753 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
EPHB3P54753 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.5□□□□□ -1.37
EPHB3P54753 AC107993.1-201ENST00000591343 684 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AC020765.1-201ENST00000604296 328 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AL049840.6-201ENST00000604583 345 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 HMGB1P51-201ENST00000605166 638 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AC092653.1-201ENST00000608509 531 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AC024941.1-201ENST00000612250 334 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AL138478.1-201ENST00000612252 832 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AC024255.1-201ENST00000614376 102 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.5□□□□□ -1.37
EPHB3P54753 AC012254.5-201ENST00000623573 478 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHB3P54753 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHB3P54753 MAPK10-287ENST00000641217 3037 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.5□□□□□ -1.37
EPHB3P54753 PARP4P1-201ENST00000435945 2337 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
EPHB3P54753 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHB3P54753 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
EPHB3P54753 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
EPHB3P54753 AC011416.1-201ENST00000514947 1732 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 TNPO1P2-201ENST00000426249 2665 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHB3P54753 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHB3P54753 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
EPHB3P54753 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHB3P54753 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHB3P54753 MTND4P31-201ENST00000425607 1343 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.49□□□□□ -1.37
EPHB3P54753 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
EPHB3P54753 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
EPHB3P54753 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
EPHB3P54753 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.49□□□□□ -1.37
EPHB3P54753 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
EPHB3P54753 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
EPHB3P54753 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
EPHB3P54753 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
EPHB3P54753 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
EPHB3P54753 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
EPHB3P54753 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
EPHB3P54753 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.49□□□□□ -1.37
EPHB3P54753 RNU5B-1-201ENST00000363286 116 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 RNU6-553P-201ENST00000364047 96 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 MIR433-201ENST00000384837 93 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 ZNF603P-201ENST00000405613 487 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 RPS21P8-201ENST00000413365 247 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 TATDN1P1-201ENST00000414123 891 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 AL445183.3-201ENST00000414168 502 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 AL158825.1-201ENST00000414735 521 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 MTND4P3-201ENST00000417829 541 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.49□□□□□ -1.37
EPHB3P54753 AL022331.1-201ENST00000429025 477 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC6.49□□□□□ -1.37
EPHB3P54753 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.49□□□□□ -1.37
EPHB3P54753 AL121601.2-201ENST00000438019 707 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 AC000041.1-201ENST00000439655 175 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
EPHB3P54753 AC092967.1-201ENST00000449016 481 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.49□□□□□ -1.37
EPHB3P54753 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.49□□□□□ -1.37
EPHB3P54753 RNU7-157P-201ENST00000459600 66 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.49□□□□□ -1.37
EPHB3P54753 AC092865.4-201ENST00000477936 615 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 RPL7P40-201ENST00000481703 745 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
EPHB3P54753 AC109464.2-201ENST00000510242 943 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 RNA5SP271-201ENST00000516700 88 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 AC067904.2-201ENST00000517322 1283 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.49□□□□□ -1.37
EPHB3P54753 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.49□□□□□ -1.37
EPHB3P54753 OR4R3P-201ENST00000525084 838 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.49□□□□□ -1.37
EPHB3P54753 OR8I1P-201ENST00000529291 931 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.49□□□□□ -1.37
EPHB3P54753 AC073916.1-201ENST00000545095 130 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.49□□□□□ -1.37
EPHB3P54753 AL121579.2-201ENST00000555466 590 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.49□□□□□ -1.37
EPHB3P54753 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.49□□□□□ -1.37
EPHB3P54753 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.49□□□□□ -1.37
EPHB3P54753 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC6.49□□□□□ -1.37
EPHB3P54753 AC090616.2-202ENST00000584248 222 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 AC015802.2-201ENST00000589690 189 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 AC008521.2-201ENST00000591021 259 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 AC122133.1-201ENST00000613964 233 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 AC126175.1-201ENST00000617041 758 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 AC007494.3-201ENST00000624660 743 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms