Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.8□□□□□ -1.32
MRE11P49959 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.8□□□□□ -1.32
MRE11P49959 AP001284.1-201ENST00000528393 2118 ntBASIC6.8□□□□□ -1.32
MRE11P49959 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
MRE11P49959 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.8□□□□□ -1.32
MRE11P49959 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.79□□□□□ -1.32
MRE11P49959 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
MRE11P49959 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 AL603750.1-201ENST00000624216 1717 ntBASIC6.79□□□□□ -1.32
MRE11P49959 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
MRE11P49959 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.79□□□□□ -1.32
MRE11P49959 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.79□□□□□ -1.32
MRE11P49959 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
MRE11P49959 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 SUGT1P2-201ENST00000379452 992 ntBASIC6.79□□□□□ -1.32
MRE11P49959 RANP6-201ENST00000413691 644 ntBASIC6.79□□□□□ -1.32
MRE11P49959 LUZP4P1-201ENST00000415420 344 ntBASIC6.79□□□□□ -1.32
MRE11P49959 HIGD1AP15-201ENST00000416198 280 ntBASIC6.79□□□□□ -1.32
MRE11P49959 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.79□□□□□ -1.32
MRE11P49959 AC115285.1-201ENST00000424879 736 ntBASIC6.79□□□□□ -1.32
MRE11P49959 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.79□□□□□ -1.32
MRE11P49959 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 RPL12P28-201ENST00000430852 489 ntBASIC6.79□□□□□ -1.32
MRE11P49959 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
MRE11P49959 GSTA7P-201ENST00000438425 448 ntBASIC6.79□□□□□ -1.32
MRE11P49959 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.79□□□□□ -1.32
MRE11P49959 PTMAP6-201ENST00000439110 327 ntBASIC6.79□□□□□ -1.32
MRE11P49959 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.79□□□□□ -1.32
MRE11P49959 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 PPIAP27-201ENST00000453800 265 ntBASIC6.79□□□□□ -1.32
MRE11P49959 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC6.79□□□□□ -1.32
MRE11P49959 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.79□□□□□ -1.32
MRE11P49959 AC091153.1-201ENST00000466297 402 ntBASIC6.79□□□□□ -1.32
MRE11P49959 AC135999.1-201ENST00000478962 479 ntBASIC6.79□□□□□ -1.32
MRE11P49959 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.79□□□□□ -1.32
MRE11P49959 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.79□□□□□ -1.32
MRE11P49959 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.79□□□□□ -1.32
MRE11P49959 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.79□□□□□ -1.32
MRE11P49959 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.79□□□□□ -1.32
MRE11P49959 AC020937.1-201ENST00000519677 1013 ntBASIC6.79□□□□□ -1.32
MRE11P49959 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.79□□□□□ -1.32
MRE11P49959 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
MRE11P49959 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.79□□□□□ -1.32
MRE11P49959 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC6.79□□□□□ -1.32
MRE11P49959 LINC00556-201ENST00000569603 412 ntBASIC6.79□□□□□ -1.32
MRE11P49959 RN7SL475P-201ENST00000583379 298 ntBASIC6.79□□□□□ -1.32
MRE11P49959 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 AC114477.1-201ENST00000605097 605 ntBASIC6.79□□□□□ -1.32
MRE11P49959 OR7M1P-201ENST00000608946 533 ntBASIC6.79□□□□□ -1.32
MRE11P49959 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.79□□□□□ -1.32
MRE11P49959 MIR6810-201ENST00000622701 70 ntBASIC6.79□□□□□ -1.32
MRE11P49959 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.79□□□□□ -1.32
MRE11P49959 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
MRE11P49959 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MRE11P49959 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
MRE11P49959 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.78□□□□□ -1.32
MRE11P49959 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
MRE11P49959 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
MRE11P49959 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
MRE11P49959 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.78□□□□□ -1.32
MRE11P49959 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
MRE11P49959 SNORD115-48-201ENST00000364764 76 ntBASIC6.78□□□□□ -1.32
MRE11P49959 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
MRE11P49959 SNORD116-2-201ENST00000384274 95 ntBASIC6.78□□□□□ -1.32
MRE11P49959 SNORD116-6-201ENST00000384711 96 ntBASIC6.78□□□□□ -1.32
MRE11P49959 RPL22P22-201ENST00000395439 379 ntBASIC6.78□□□□□ -1.32
MRE11P49959 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.78□□□□□ -1.32
MRE11P49959 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.78□□□□□ -1.32
MRE11P49959 AC013262.1-201ENST00000426710 252 ntBASIC6.78□□□□□ -1.32
MRE11P49959 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.78□□□□□ -1.32
MRE11P49959 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
MRE11P49959 AL513321.1-201ENST00000441175 761 ntBASIC6.78□□□□□ -1.32
MRE11P49959 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.78□□□□□ -1.32
MRE11P49959 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.78□□□□□ -1.32
MRE11P49959 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.78□□□□□ -1.32
MRE11P49959 CABYRP1-201ENST00000465493 1045 ntBASIC6.78□□□□□ -1.32
MRE11P49959 PFN1P6-201ENST00000476786 399 ntBASIC6.78□□□□□ -1.32
MRE11P49959 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.78□□□□□ -1.32
MRE11P49959 RN7SL104P-201ENST00000498686 293 ntBASIC6.78□□□□□ -1.32
MRE11P49959 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.78□□□□□ -1.32
MRE11P49959 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
MRE11P49959 RNA5SP34-201ENST00000516887 130 ntBASIC6.78□□□□□ -1.32
MRE11P49959 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.78□□□□□ -1.32
MRE11P49959 UBTFL9-201ENST00000534504 1148 ntBASIC6.78□□□□□ -1.32
MRE11P49959 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
MRE11P49959 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.78□□□□□ -1.32
MRE11P49959 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.78□□□□□ -1.32
MRE11P49959 AC119403.2-201ENST00000590960 598 ntBASIC6.78□□□□□ -1.32
MRE11P49959 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
MRE11P49959 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.78□□□□□ -1.32
MRE11P49959 RPP40P2-201ENST00000603596 712 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 233 ms