Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN9P43378 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN9P43378 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN9P43378 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PTPN9P43378 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PTPN9P43378 SNORA17A-201ENST00000391185 133 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN9P43378 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN9P43378 AC009784.1-201ENST00000426484 460 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 RPL12P17-201ENST00000432393 498 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN9P43378 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN9P43378 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN9P43378 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN9P43378 AC006326.1-201ENST00000445465 787 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.71□□□□□ -1.5
PTPN9P43378 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN9P43378 NPM1P19-201ENST00000450070 712 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 EIF2S2P5-201ENST00000457635 968 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PTPN9P43378 MTND6P2-201ENST00000512226 524 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN9P43378 AC097486.1-201ENST00000515331 210 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN9P43378 VTA1P2-201ENST00000520205 911 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
PTPN9P43378 AC113192.3-201ENST00000529152 742 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN9P43378 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN9P43378 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN9P43378 AP005403.1-201ENST00000579720 229 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN9P43378 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.71□□□□□ -1.5
PTPN9P43378 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN9P43378 AC005776.1-201ENST00000603164 290 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN9P43378 AC104695.2-201ENST00000605056 775 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 AC004775.1-201ENST00000607389 753 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN9P43378 RNU6-84P-201ENST00000607737 102 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN9P43378 AL096803.3-201ENST00000609032 532 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 AC018645.2-201ENST00000609151 472 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN9P43378 SNORA17.5-201ENST00000630429 132 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN9P43378 AL356317.1-201ENST00000396110 1436 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 AC092111.2-201ENST00000611627 1414 ntBASIC5.71□□□□□ -1.5
PTPN9P43378 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN9P43378 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN9P43378 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PTPN9P43378 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN9P43378 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN9P43378 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN9P43378 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN9P43378 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN9P43378 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN9P43378 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
PTPN9P43378 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN9P43378 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.7□□□□□ -1.5
PTPN9P43378 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN9P43378 AC009501.3-201ENST00000605001 1352 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN9P43378 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN9P43378 MTCO1P7-201ENST00000419523 1542 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN9P43378 AC093849.1-201ENST00000563631 2209 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PTPN9P43378 SNORD65-201ENST00000391079 73 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 RNA5SP178-201ENST00000410380 128 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN9P43378 RANP4-201ENST00000413361 655 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 Z93019.1-201ENST00000416450 973 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.7□□□□□ -1.5
PTPN9P43378 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.7□□□□□ -1.5
PTPN9P43378 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN9P43378 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.7□□□□□ -1.5
PTPN9P43378 MTND2P40-201ENST00000436718 841 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 AL390119.1-201ENST00000440329 312 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 AC245517.2-201ENST00000442890 346 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.7□□□□□ -1.5
PTPN9P43378 AL672138.1-201ENST00000450604 1015 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 YWHAEP1-201ENST00000453697 763 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 AL035090.1-201ENST00000454835 332 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.7□□□□□ -1.5
PTPN9P43378 CAB39P1-201ENST00000502277 460 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN9P43378 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.7□□□□□ -1.5
PTPN9P43378 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.7□□□□□ -1.5
PTPN9P43378 MTATP6P9-201ENST00000515039 680 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 AC067904.2-201ENST00000517322 1283 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
PTPN9P43378 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
PTPN9P43378 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.7□□□□□ -1.5
PTPN9P43378 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.7□□□□□ -1.5
PTPN9P43378 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN9P43378 OR11H3P-201ENST00000554547 982 ntBASIC5.7□□□□□ -1.5
PTPN9P43378 AC022404.1-201ENST00000555320 273 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms