Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMBP28068 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HLA-DMBP28068 RNU1-19P-201ENST00000363306 165 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 RNU4-2-201ENST00000365668 141 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 RN7SKP59-201ENST00000410520 314 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 CBX1P3-201ENST00000413296 527 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DMBP28068 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HLA-DMBP28068 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DMBP28068 AC012075.1-201ENST00000436549 580 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 AL390119.1-201ENST00000440329 312 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 SPRYD7P1-201ENST00000443861 570 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 AC007386.1-201ENST00000455212 582 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 RN7SL51P-201ENST00000468230 285 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 AC100832.1-201ENST00000471945 383 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 RN7SL177P-201ENST00000476596 299 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 NPM1P29-201ENST00000483112 803 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 RN7SL184P-201ENST00000488308 297 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 AC108693.1-201ENST00000496068 432 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DMBP28068 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DMBP28068 IGLV2-28-201ENST00000520681 304 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 NRBF2P4-201ENST00000520874 850 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 IGKV2-18-201ENST00000522607 343 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 AC100784.1-201ENST00000522790 310 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 AC090022.1-201ENST00000546569 311 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 AC125612.1-201ENST00000547580 377 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 RN7SL356P-201ENST00000582228 248 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 AC011626.1-201ENST00000604710 562 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 MIR6839-201ENST00000620425 113 ntBASIC4.02□□□□□ -1.77
HLA-DMBP28068 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DMBP28068 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMBP28068 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DMBP28068 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DMBP28068 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMBP28068 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMBP28068 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMBP28068 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMBP28068 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMBP28068 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DMBP28068 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMBP28068 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DMBP28068 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMBP28068 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMBP28068 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMBP28068 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMBP28068 ZNF652P1-201ENST00000442420 1309 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC063976.2-201ENST00000425667 3556 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMBP28068 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC021242.1-201ENST00000507315 2035 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMBP28068 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AL050305.1-201ENST00000399993 1230 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 AL391422.1-201ENST00000402155 436 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 RPL21P67-201ENST00000402896 478 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 NPM1P4-201ENST00000414095 812 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC124944.2-201ENST00000429866 1242 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC013410.1-201ENST00000436223 1232 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AL672138.1-201ENST00000450604 1015 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC104634.1-201ENST00000452720 462 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 RPS26P39-201ENST00000469206 341 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 AP000797.2-201ENST00000475768 606 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC098976.1-201ENST00000513014 541 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC022884.2-201ENST00000578535 580 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 RBM22P1-201ENST00000578589 1214 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC127024.5-201ENST00000580085 462 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 NPM1P45-201ENST00000583151 559 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 AC109583.2-201ENST00000617367 129 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMBP28068 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMBP28068 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DMBP28068 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 TRIM51GP-201ENST00000534741 1350 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 BTBD10P1-201ENST00000549824 1352 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DMBP28068 SMG1P7-201ENST00000565246 2704 ntBASIC4.01□□□□□ -1.77
HLA-DMBP28068 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DMBP28068 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms