Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LIG1P18858 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.32□□□□□ -1.24
LIG1P18858 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LIG1P18858 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.32□□□□□ -1.24
LIG1P18858 RN7SKP186-201ENST00000365371 303 ntBASIC7.32□□□□□ -1.24
LIG1P18858 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
LIG1P18858 AL133264.1-201ENST00000407157 562 ntBASIC7.32□□□□□ -1.24
LIG1P18858 RN7SKP273-201ENST00000411392 314 ntBASIC7.32□□□□□ -1.24
LIG1P18858 AC234781.4-201ENST00000419384 244 ntBASIC7.32□□□□□ -1.24
LIG1P18858 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC7.32□□□□□ -1.24
LIG1P18858 AC004074.1-201ENST00000421810 1063 ntBASIC7.32□□□□□ -1.24
LIG1P18858 REREP1Y-201ENST00000422655 198 ntBASIC7.32□□□□□ -1.24
LIG1P18858 YWHAZP7-201ENST00000436906 631 ntBASIC7.32□□□□□ -1.24
LIG1P18858 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.32□□□□□ -1.24
LIG1P18858 REREP2Y-201ENST00000439103 200 ntBASIC7.32□□□□□ -1.24
LIG1P18858 AC064862.5-201ENST00000440618 334 ntBASIC7.32□□□□□ -1.24
LIG1P18858 VN1R38P-201ENST00000450265 887 ntBASIC7.32□□□□□ -1.24
LIG1P18858 YRDCP3-201ENST00000456507 480 ntBASIC7.32□□□□□ -1.24
LIG1P18858 RPL7P32-201ENST00000457119 744 ntBASIC7.32□□□□□ -1.24
LIG1P18858 AC004890.1-201ENST00000461005 181 ntBASIC7.32□□□□□ -1.24
LIG1P18858 RN7SL221P-201ENST00000466190 281 ntBASIC7.32□□□□□ -1.24
LIG1P18858 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.32□□□□□ -1.24
LIG1P18858 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.32□□□□□ -1.24
LIG1P18858 NACAP5-201ENST00000509863 636 ntBASIC7.32□□□□□ -1.24
LIG1P18858 LTV1P1-201ENST00000510683 1237 ntBASIC7.32□□□□□ -1.24
LIG1P18858 AC093664.1-201ENST00000511779 289 ntBASIC7.32□□□□□ -1.24
LIG1P18858 MTND4LP26-201ENST00000518144 282 ntBASIC7.32□□□□□ -1.24
LIG1P18858 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.32□□□□□ -1.24
LIG1P18858 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.32□□□□□ -1.24
LIG1P18858 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.32□□□□□ -1.24
LIG1P18858 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC7.32□□□□□ -1.24
LIG1P18858 OR4H6P-201ENST00000563771 921 ntBASIC7.32□□□□□ -1.24
LIG1P18858 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
LIG1P18858 MIR4719-201ENST00000585233 84 ntBASIC7.32□□□□□ -1.24
LIG1P18858 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.32□□□□□ -1.24
LIG1P18858 AC125494.3-201ENST00000602759 455 ntBASIC7.32□□□□□ -1.24
LIG1P18858 AL135786.2-201ENST00000608422 615 ntBASIC7.32□□□□□ -1.24
LIG1P18858 PDCD6IPP1-202ENST00000622242 1064 ntBASIC7.32□□□□□ -1.24
LIG1P18858 AL008636.1-201ENST00000625038 1018 ntBASIC7.32□□□□□ -1.24
LIG1P18858 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC7.32□□□□□ -1.24
LIG1P18858 GTF2IP4-201ENST00000453092 2054 ntBASIC7.32□□□□□ -1.24
LIG1P18858 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.32□□□□□ -1.24
LIG1P18858 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
LIG1P18858 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LIG1P18858 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
LIG1P18858 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.32□□□□□ -1.24
LIG1P18858 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
LIG1P18858 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
LIG1P18858 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
LIG1P18858 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.31□□□□□ -1.24
LIG1P18858 PPIAP24-201ENST00000328558 471 ntBASIC7.31□□□□□ -1.24
LIG1P18858 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 AL356317.1-201ENST00000396110 1436 ntBASIC7.31□□□□□ -1.24
LIG1P18858 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.31□□□□□ -1.24
LIG1P18858 AL929472.1-201ENST00000417484 429 ntBASIC7.31□□□□□ -1.24
LIG1P18858 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.31□□□□□ -1.24
LIG1P18858 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC7.31□□□□□ -1.24
LIG1P18858 DPPA2P1-201ENST00000428060 556 ntBASIC7.31□□□□□ -1.24
LIG1P18858 AL022331.1-201ENST00000429025 477 ntBASIC7.31□□□□□ -1.24
LIG1P18858 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC7.31□□□□□ -1.24
LIG1P18858 AC003989.1-201ENST00000434569 565 ntBASIC7.31□□□□□ -1.24
LIG1P18858 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.31□□□□□ -1.24
LIG1P18858 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.31□□□□□ -1.24
LIG1P18858 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.31□□□□□ -1.24
LIG1P18858 AL022237.1-201ENST00000446663 358 ntBASIC7.31□□□□□ -1.24
LIG1P18858 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.31□□□□□ -1.24
LIG1P18858 RPS27AP3-201ENST00000453803 454 ntBASIC7.31□□□□□ -1.24
LIG1P18858 GTF2IP12-201ENST00000456547 356 ntBASIC7.31□□□□□ -1.24
LIG1P18858 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
LIG1P18858 AC091544.1-201ENST00000484702 348 ntBASIC7.31□□□□□ -1.24
LIG1P18858 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 AC092349.1-201ENST00000504903 310 ntBASIC7.31□□□□□ -1.24
LIG1P18858 HPRT1P2-201ENST00000505250 544 ntBASIC7.31□□□□□ -1.24
LIG1P18858 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.31□□□□□ -1.24
LIG1P18858 AC138517.1-201ENST00000515724 568 ntBASIC7.31□□□□□ -1.24
LIG1P18858 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.31□□□□□ -1.24
LIG1P18858 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 NBEAP1-201ENST00000554452 979 ntBASIC7.31□□□□□ -1.24
LIG1P18858 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.31□□□□□ -1.24
LIG1P18858 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.31□□□□□ -1.24
LIG1P18858 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.31□□□□□ -1.24
LIG1P18858 AC009237.12-201ENST00000604755 742 ntBASIC7.31□□□□□ -1.24
LIG1P18858 AC005021.1-201ENST00000608730 355 ntBASIC7.31□□□□□ -1.24
LIG1P18858 AC068726.1-201ENST00000610993 341 ntBASIC7.31□□□□□ -1.24
LIG1P18858 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.31□□□□□ -1.24
LIG1P18858 AL138960.1-201ENST00000613838 513 ntBASIC7.31□□□□□ -1.24
LIG1P18858 AL359513.1-201ENST00000614364 557 ntBASIC7.31□□□□□ -1.24
LIG1P18858 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 AOX3P-204ENST00000491025 2107 ntBASIC7.31□□□□□ -1.24
LIG1P18858 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
LIG1P18858 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 CR381670.1-201ENST00000624291 1693 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms