Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MSL3P1-202ENST00000440028 1468 ntBASIC8.71□□□□□ -1.02
TOP2AP11388 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
TOP2AP11388 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC8.71□□□□□ -1.02
TOP2AP11388 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC8.7□□□□□ -1.02
TOP2AP11388 SNORA48.4-201ENST00000391089 134 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 RNA5SP397-201ENST00000391323 118 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC8.7□□□□□ -1.02
TOP2AP11388 AC009480.2-201ENST00000422916 432 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC8.7□□□□□ -1.02
TOP2AP11388 AL136455.1-201ENST00000441083 1240 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.7□□□□□ -1.02
TOP2AP11388 AL356981.1-201ENST00000454879 684 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC8.7□□□□□ -1.02
TOP2AP11388 MIR4277-201ENST00000578298 84 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC8.7□□□□□ -1.02
TOP2AP11388 AL121873.1-201ENST00000616013 524 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 AL359757.1-201ENST00000623176 255 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 AC016717.3-201ENST00000624730 554 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 AL355834.1-201ENST00000556602 3965 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
TOP2AP11388 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TOP2AP11388 SMG1P6-201ENST00000532337 2930 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
TOP2AP11388 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TOP2AP11388 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
TOP2AP11388 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TOP2AP11388 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC8.7□□□□□ -1.02
TOP2AP11388 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
TOP2AP11388 AC107980.1-201ENST00000558671 3355 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 SNORA70.6-201ENST00000383934 134 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
TOP2AP11388 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.7□□□□□ -1.02
TOP2AP11388 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC8.7□□□□□ -1.02
TOP2AP11388 AC103987.1-201ENST00000473394 348 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 AC013356.1-201ENST00000489027 564 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC8.7□□□□□ -1.02
TOP2AP11388 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC8.7□□□□□ -1.02
TOP2AP11388 AC020915.5-201ENST00000596836 964 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 AL445423.1-201ENST00000609941 536 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 OR52H1-202ENST00000641796 1061 ntBASIC8.7□□□□□ -1.02
TOP2AP11388 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
TOP2AP11388 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TOP2AP11388 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
TOP2AP11388 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TOP2AP11388 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.69□□□□□ -1.02
TOP2AP11388 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TOP2AP11388 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
TOP2AP11388 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
TOP2AP11388 RNA5-8SP7-201ENST00000363443 155 ntBASIC8.69□□□□□ -1.02
TOP2AP11388 RNA5SP479-201ENST00000364858 117 ntBASIC8.69□□□□□ -1.02
TOP2AP11388 MIR298-201ENST00000401212 88 ntBASIC8.69□□□□□ -1.02
TOP2AP11388 RPL34P27-201ENST00000428810 349 ntBASIC8.69□□□□□ -1.02
TOP2AP11388 AL359265.1-201ENST00000440296 795 ntBASIC8.69□□□□□ -1.02
TOP2AP11388 TXNP2-201ENST00000443918 295 ntBASIC8.69□□□□□ -1.02
TOP2AP11388 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC8.69□□□□□ -1.02
TOP2AP11388 MAL2-201ENST00000522112 573 ntTSL 4 BASIC8.69□□□□□ -1.02
TOP2AP11388 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC8.69□□□□□ -1.02
TOP2AP11388 RN7SL290P-201ENST00000578661 300 ntBASIC8.69□□□□□ -1.02
TOP2AP11388 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TOP2AP11388 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TOP2AP11388 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TOP2AP11388 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
TOP2AP11388 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
TOP2AP11388 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TOP2AP11388 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TOP2AP11388 AL359955.1-201ENST00000455242 3275 ntBASIC8.68□□□□□ -1.02
TOP2AP11388 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC8.68□□□□□ -1.02
TOP2AP11388 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.68□□□□□ -1.02
TOP2AP11388 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC8.68□□□□□ -1.02
TOP2AP11388 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TOP2AP11388 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
TOP2AP11388 OFD1P9Y-201ENST00000417699 1491 ntBASIC8.68□□□□□ -1.02
TOP2AP11388 SNORD113.2-201ENST00000364166 89 ntBASIC8.68□□□□□ -1.02
TOP2AP11388 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TOP2AP11388 GLUD1P9-201ENST00000420997 1173 ntBASIC8.68□□□□□ -1.02
TOP2AP11388 MRPS21P2-201ENST00000424704 264 ntBASIC8.68□□□□□ -1.02
TOP2AP11388 AC016831.4-201ENST00000438302 307 ntBASIC8.68□□□□□ -1.02
TOP2AP11388 SCAND3P1-201ENST00000439854 1060 ntBASIC8.68□□□□□ -1.02
TOP2AP11388 AL450023.3-201ENST00000440592 271 ntBASIC8.68□□□□□ -1.02
TOP2AP11388 snoU13.1-201ENST00000459157 104 ntBASIC8.68□□□□□ -1.02
TOP2AP11388 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC8.68□□□□□ -1.02
TOP2AP11388 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC8.68□□□□□ -1.02
TOP2AP11388 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC8.68□□□□□ -1.02
TOP2AP11388 RPL12P25-202ENST00000598100 674 ntBASIC8.68□□□□□ -1.02
TOP2AP11388 AC007382.1-201ENST00000624376 2618 ntBASIC8.68□□□□□ -1.02
TOP2AP11388 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TOP2AP11388 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC8.68□□□□□ -1.02
TOP2AP11388 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TOP2AP11388 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC8.67□□□□□ -1.02
TOP2AP11388 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TOP2AP11388 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TOP2AP11388 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC8.67□□□□□ -1.02
TOP2AP11388 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC8.67□□□□□ -1.02
TOP2AP11388 AL035079.1-201ENST00000405210 287 ntBASIC8.67□□□□□ -1.02
TOP2AP11388 RN7SKP16-201ENST00000410180 299 ntBASIC8.67□□□□□ -1.02
TOP2AP11388 RNU4-64P-201ENST00000410795 131 ntBASIC8.67□□□□□ -1.02
TOP2AP11388 AC234779.1-201ENST00000425910 285 ntBASIC8.67□□□□□ -1.02
TOP2AP11388 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC8.67□□□□□ -1.02
TOP2AP11388 RPS5P7-201ENST00000456664 608 ntBASIC8.67□□□□□ -1.02
TOP2AP11388 AC104971.1-201ENST00000495117 578 ntBASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms