Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 RBMY2TP-201ENST00000451162 947 ntBASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 RN7SL197P-201ENST00000466981 299 ntBASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 AC079841.1-201ENST00000481228 950 ntBASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 PGAM1P13-201ENST00000507497 754 ntBASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 PMS2P3-207ENST00000529061 717 ntBASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 AC044860.2-201ENST00000561005 179 ntBASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 AC040174.2-201ENST00000602701 465 ntBASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 HIRAP1-201ENST00000605318 787 ntBASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RAB40ALP0C0E4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
RAB40ALP0C0E4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
RAB40ALP0C0E4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.21□□□□□ -1.57
RAB40ALP0C0E4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.21□□□□□ -1.57
RAB40ALP0C0E4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RAB40ALP0C0E4 ADAM24P-201ENST00000398655 2101 ntBASIC5.21□□□□□ -1.57
RAB40ALP0C0E4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
RAB40ALP0C0E4 MT-RNR2-201ENST00000387347 1559 ntBASIC5.21□□□□□ -1.57
RAB40ALP0C0E4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RAB40ALP0C0E4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.57
RAB40ALP0C0E4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 RNA5SP335-201ENST00000363817 110 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 GSTA12P-201ENST00000402398 508 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 RN7SKP279-201ENST00000411383 298 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 DPPA2P3-201ENST00000411853 655 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AL139148.1-201ENST00000427122 680 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AC092106.1-201ENST00000444291 373 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 RN7SL610P-201ENST00000463845 291 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 LARP7P4-201ENST00000481075 878 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 ATP5LP5-201ENST00000483050 299 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 OR5M14P-201ENST00000506803 618 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AC016550.3-201ENST00000515706 767 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AP000619.2-201ENST00000546014 969 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AC126177.5-201ENST00000549599 178 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 LINC00557-201ENST00000563184 1279 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AC008536.1-201ENST00000602872 669 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AC015712.7-201ENST00000615211 635 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 MIR6730-201ENST00000622213 67 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AC006453.5-201ENST00000636451 619 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 AL161912.4-201ENST00000623889 2468 ntBASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
RAB40ALP0C0E4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 AC007342.5-201ENST00000571340 2142 ntBASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 AC109446.4-201ENST00000623235 2755 ntBASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 SNORA58B-201ENST00000364259 136 ntBASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 RNU1-77P-201ENST00000390868 162 ntBASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 DPPA2P2-201ENST00000418220 897 ntBASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 MTND2P11-201ENST00000423638 648 ntBASIC5.2□□□□□ -1.58
RAB40ALP0C0E4 MTND4LP13-201ENST00000425022 298 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms