Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 AL627230.1-201ENST00000613077 211 ntBASIC5.15□□□□□ -1.59
HLA-DQB2P05538 AL591926.8-201ENST00000616876 211 ntBASIC5.15□□□□□ -1.59
HLA-DQB2P05538 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.15□□□□□ -1.59
HLA-DQB2P05538 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AP000473.2-201ENST00000602659 1537 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 MIR323B-201ENST00000385269 82 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 MIR1178-201ENST00000408396 91 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 DDX39BP1-205ENST00000422507 192 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 BX119904.3-201ENST00000428194 957 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 DEFB109A-201ENST00000482450 265 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 RN7SL441P-201ENST00000492388 296 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AL512310.9-201ENST00000553311 948 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 NDUFB4P11-201ENST00000560510 395 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AC011447.4-201ENST00000587562 111 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AC105254.2-201ENST00000603636 436 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AP000894.4-201ENST00000610185 483 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AL139407.1-201ENST00000613826 1175 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 LINC01739-205ENST00000641890 573 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AC119674.1-217ENST00000641942 1086 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HLA-DQB2P05538 RARSP1-201ENST00000542842 1418 ntBASIC5.14□□□□□ -1.59
HLA-DQB2P05538 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 NXF4-202ENST00000416098 1465 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AC011755.1-201ENST00000623763 2049 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 RPS29P9-201ENST00000440360 171 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 TXNP5-201ENST00000441043 315 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AL354714.3-201ENST00000447284 493 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 TCEA1P1-201ENST00000449716 880 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 IGHV5-78-201ENST00000450948 295 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AC018638.3-201ENST00000461273 132 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 RN7SL177P-201ENST00000476596 299 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 HMGN2P25-201ENST00000486956 268 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 RN7SKP260-201ENST00000516907 149 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AC012339.2-201ENST00000523996 453 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AC092490.3-201ENST00000545370 572 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 HAUS8P1-201ENST00000549005 542 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AL359219.2-201ENST00000555184 348 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AC006116.3-201ENST00000592968 361 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AC125494.2-201ENST00000602431 657 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms