Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.05□□□□□ -1.28
SOX1O00570 AC074029.1-201ENST00000552531 1044 ntBASIC7.05□□□□□ -1.28
SOX1O00570 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.05□□□□□ -1.28
SOX1O00570 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC7.05□□□□□ -1.28
SOX1O00570 AC009101.1-201ENST00000568135 242 ntBASIC7.05□□□□□ -1.28
SOX1O00570 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC7.05□□□□□ -1.28
SOX1O00570 MIR1269B-201ENST00000580405 75 ntBASIC7.05□□□□□ -1.28
SOX1O00570 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.05□□□□□ -1.28
SOX1O00570 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC7.05□□□□□ -1.28
SOX1O00570 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.05□□□□□ -1.28
SOX1O00570 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.05□□□□□ -1.28
SOX1O00570 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC7.05□□□□□ -1.28
SOX1O00570 AC008945.2-201ENST00000606056 604 ntBASIC7.05□□□□□ -1.28
SOX1O00570 AC007038.2-201ENST00000608095 740 ntBASIC7.05□□□□□ -1.28
SOX1O00570 AL159169.3-201ENST00000608871 561 ntBASIC7.05□□□□□ -1.28
SOX1O00570 AL136981.2-201ENST00000617319 734 ntBASIC7.05□□□□□ -1.28
SOX1O00570 AC025048.6-202ENST00000627667 438 ntBASIC7.05□□□□□ -1.28
SOX1O00570 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SOX1O00570 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SOX1O00570 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.05□□□□□ -1.28
SOX1O00570 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SOX1O00570 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
SOX1O00570 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SOX1O00570 KARSP2-201ENST00000415696 1639 ntBASIC7.05□□□□□ -1.28
SOX1O00570 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.05□□□□□ -1.28
SOX1O00570 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
SOX1O00570 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.05□□□□□ -1.28
SOX1O00570 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SOX1O00570 HSPA8P11-201ENST00000508840 1898 ntBASIC7.04□□□□□ -1.28
SOX1O00570 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.04□□□□□ -1.28
SOX1O00570 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.04□□□□□ -1.28
SOX1O00570 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 AP004289.1-201ENST00000436307 2205 ntBASIC7.04□□□□□ -1.28
SOX1O00570 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 AC068860.1-201ENST00000623701 3736 ntBASIC7.04□□□□□ -1.28
SOX1O00570 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SOX1O00570 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SOX1O00570 Y_RNA.70-201ENST00000362886 110 ntBASIC7.04□□□□□ -1.28
SOX1O00570 RNA5SP132-201ENST00000364725 118 ntBASIC7.04□□□□□ -1.28
SOX1O00570 SNORA70.3-201ENST00000365075 132 ntBASIC7.04□□□□□ -1.28
SOX1O00570 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.04□□□□□ -1.28
SOX1O00570 AL590143.1-201ENST00000405071 138 ntBASIC7.04□□□□□ -1.28
SOX1O00570 RN7SKP161-201ENST00000411110 305 ntBASIC7.04□□□□□ -1.28
SOX1O00570 RPL37P18-201ENST00000411602 243 ntBASIC7.04□□□□□ -1.28
SOX1O00570 AC244452.1-201ENST00000413798 141 ntBASIC7.04□□□□□ -1.28
SOX1O00570 RPL21P108-201ENST00000413857 481 ntBASIC7.04□□□□□ -1.28
SOX1O00570 MTCO3P1-205ENST00000422088 832 ntBASIC7.04□□□□□ -1.28
SOX1O00570 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC7.04□□□□□ -1.28
SOX1O00570 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.04□□□□□ -1.28
SOX1O00570 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC7.04□□□□□ -1.28
SOX1O00570 PRDX1P1-201ENST00000449329 596 ntBASIC7.04□□□□□ -1.28
SOX1O00570 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 SULT1D1P-201ENST00000458020 882 ntBASIC7.04□□□□□ -1.28
SOX1O00570 AL672167.3-201ENST00000465951 960 ntBASIC7.04□□□□□ -1.28
SOX1O00570 AC072039.1-201ENST00000477611 581 ntBASIC7.04□□□□□ -1.28
SOX1O00570 AC107398.1-201ENST00000486904 505 ntBASIC7.04□□□□□ -1.28
SOX1O00570 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 AC117522.1-201ENST00000509821 380 ntBASIC7.04□□□□□ -1.28
SOX1O00570 AC120036.3-201ENST00000517826 292 ntBASIC7.04□□□□□ -1.28
SOX1O00570 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC7.04□□□□□ -1.28
SOX1O00570 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.04□□□□□ -1.28
SOX1O00570 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.04□□□□□ -1.28
SOX1O00570 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 AC074050.1-201ENST00000563247 211 ntBASIC7.04□□□□□ -1.28
SOX1O00570 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.04□□□□□ -1.28
SOX1O00570 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.04□□□□□ -1.28
SOX1O00570 AC068768.2-201ENST00000602352 343 ntBASIC7.04□□□□□ -1.28
SOX1O00570 AC103881.1-201ENST00000603476 538 ntBASIC7.04□□□□□ -1.28
SOX1O00570 CR382285.1-202ENST00000604687 547 ntBASIC7.04□□□□□ -1.28
SOX1O00570 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.04□□□□□ -1.28
SOX1O00570 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 AC007014.2-201ENST00000615581 479 ntBASIC7.04□□□□□ -1.28
SOX1O00570 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 AC087565.3-203ENST00000641018 837 ntBASIC7.04□□□□□ -1.28
SOX1O00570 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.04□□□□□ -1.28
SOX1O00570 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.04□□□□□ -1.28
SOX1O00570 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
SOX1O00570 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SOX1O00570 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.04□□□□□ -1.28
SOX1O00570 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms