Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC28A1O00337 AC134669.1-201ENST00000581275 672 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC28A1O00337 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC28A1O00337 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC28A1O00337 AC009597.2-201ENST00000604659 592 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC28A1O00337 Z95327.3-201ENST00000610385 572 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC28A1O00337 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC28A1O00337 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC28A1O00337 SMG1P7-201ENST00000565246 2704 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC28A1O00337 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC28A1O00337 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC28A1O00337 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC28A1O00337 AL034549.2-201ENST00000618285 3373 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC28A1O00337 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
SLC28A1O00337 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC28A1O00337 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC28A1O00337 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC28A1O00337 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC28A1O00337 AC010132.2-201ENST00000295493 1043 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 AC005294.1-201ENST00000355509 281 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 SNORA79B-201ENST00000410557 148 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.12□□□□□ -1.59
SLC28A1O00337 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC28A1O00337 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC28A1O00337 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC28A1O00337 GAPDHP58-201ENST00000438477 1006 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC28A1O00337 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC28A1O00337 AC058823.1-201ENST00000485315 474 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 RN7SL814P-201ENST00000487715 300 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC28A1O00337 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.12□□□□□ -1.59
SLC28A1O00337 RN7SKP70-201ENST00000516655 271 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC28A1O00337 TMEM97P2-201ENST00000517841 403 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.12□□□□□ -1.59
SLC28A1O00337 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC28A1O00337 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC28A1O00337 AC015720.2-201ENST00000567709 334 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC28A1O00337 AC022884.2-201ENST00000578535 580 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 MIR4505-201ENST00000582238 73 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 AL162431.4-201ENST00000604674 411 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 AC011626.1-201ENST00000604710 562 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC28A1O00337 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SLC28A1O00337 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC28A1O00337 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC28A1O00337 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC28A1O00337 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.12□□□□□ -1.59
SLC28A1O00337 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC28A1O00337 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SLC28A1O00337 AL353796.1-201ENST00000561542 3241 ntBASIC5.12□□□□□ -1.59
SLC28A1O00337 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC28A1O00337 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC28A1O00337 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SLC28A1O00337 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC28A1O00337 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC28A1O00337 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC28A1O00337 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC28A1O00337 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC28A1O00337 MIR7-1-201ENST00000384871 110 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 MT-RNR1-201ENST00000389680 954 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC28A1O00337 HMGB3P10-201ENST00000434734 572 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 SUMO2P3-201ENST00000438311 288 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 CYCSP24-201ENST00000445119 316 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 RSL24D1P2-201ENST00000445584 366 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC28A1O00337 AC021660.1-201ENST00000465006 554 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 RPL7P40-201ENST00000481703 745 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 RN7SL741P-201ENST00000482473 289 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 COX6B1P2-201ENST00000489624 230 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 EIF3LP3-201ENST00000495197 822 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.11□□□□□ -1.59
SLC28A1O00337 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC28A1O00337 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.11□□□□□ -1.59
SLC28A1O00337 OR7E10P-201ENST00000526420 991 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC28A1O00337 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC28A1O00337 YWHABP2-201ENST00000540201 713 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 AC068993.1-201ENST00000546724 589 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 FAM106CP-201ENST00000582212 507 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC28A1O00337 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.11□□□□□ -1.59
SLC28A1O00337 AL499605.1-201ENST00000604628 403 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 AC100767.2-201ENST00000604840 693 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 FAM72A-208ENST00000607379 1139 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.11□□□□□ -1.59
SLC28A1O00337 AF117829.2-201ENST00000619538 361 ntBASIC5.11□□□□□ -1.59
SLC28A1O00337 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.11□□□□□ -1.59
SLC28A1O00337 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.11□□□□□ -1.59
SLC28A1O00337 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC28A1O00337 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms