Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC103591.2-201ENST00000265259 766 ntBASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 HSPA8P15-201ENST00000401676 786 ntBASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 NACAP7-201ENST00000407371 609 ntBASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 CTSL3P-202ENST00000412179 788 ntBASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 RIMKLBP2-201ENST00000424737 654 ntBASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 ENPP7P11-201ENST00000505915 627 ntBASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC024940.3-201ENST00000538551 316 ntBASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC092490.3-201ENST00000545370 572 ntBASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC005084.1-201ENST00000605160 304 ntBASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL353684.1-201ENST00000622677 1120 ntBASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 OR4F13P-202ENST00000560066 2054 ntBASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TMX2-CTNND1H3BSU7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC068870.1-201ENST00000563737 2455 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC025574.1-201ENST00000554784 1653 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL121886.1-201ENST00000358609 435 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL590762.4-201ENST00000425885 253 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 IGBP1P3-201ENST00000447449 1000 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 RPL7P61-201ENST00000451721 751 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC245028.2-201ENST00000458673 253 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 SNORD125-201ENST00000459538 96 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 RN7SL188P-201ENST00000469842 285 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 RPS17P5-201ENST00000498293 408 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC092593.2-201ENST00000513866 913 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 RNU6-941P-201ENST00000516346 108 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC013701.1-201ENST00000522657 465 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC137627.1-201ENST00000545761 289 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC106730.2-201ENST00000566641 540 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 RBM22P1-201ENST00000578589 1214 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC133644.2-201ENST00000608142 540 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC099494.2-201ENST00000623371 978 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 AP001784.1-201ENST00000624107 428 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 LINC01739-205ENST00000641890 573 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 MAPK10-263ENST00000641052 4307 ntBASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TMX2-CTNND1H3BSU7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 CASC19-281ENST00000642118 1554 ntBASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 U3.2-201ENST00000362981 210 ntBASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 RN7SKP115-201ENST00000363177 317 ntBASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 RNA5SP326-201ENST00000363209 110 ntBASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 OR10T1P-201ENST00000424327 947 ntBASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC092647.3-201ENST00000443044 633 ntBASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL161722.1-201ENST00000446972 1032 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms