Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 CHEK2P3-201ENST00000416118 248 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 OR2AM1P-201ENST00000422137 422 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AL590399.4-201ENST00000436561 601 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AL354714.3-201ENST00000447284 493 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 GAPDHP14-201ENST00000450472 937 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 IGHV5-78-201ENST00000450948 295 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 RPS3AP41-201ENST00000462701 778 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 RPSAP51-201ENST00000497462 645 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AC027369.5-201ENST00000533838 755 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AC087783.2-201ENST00000605070 562 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AC116651.1-201ENST00000609724 556 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AC087385.3-201ENST00000620477 187 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AP001784.1-201ENST00000624107 428 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 SCARNA15-201ENST00000607520 4325 ntBASIC5.47□□□□□ -1.53
SMIM28A0A1B0GU29 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
SMIM28A0A1B0GU29 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
SMIM28A0A1B0GU29 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
SMIM28A0A1B0GU29 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SMIM28A0A1B0GU29 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.46□□□□□ -1.53
SMIM28A0A1B0GU29 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 AP002530.1-201ENST00000405705 684 ntBASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 AC104837.2-201ENST00000427236 424 ntBASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 OR7E125P-201ENST00000443450 846 ntBASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 TCEA1P1-201ENST00000449716 880 ntBASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 RPS3AP53-201ENST00000454716 778 ntBASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 RPL7P16-201ENST00000479738 738 ntBASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 PCNPP1-201ENST00000552501 511 ntBASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 AC019322.1-201ENST00000571869 389 ntBASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 AC005084.1-201ENST00000605160 304 ntBASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 FAM25E-202ENST00000608562 189 ntBASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 AL356752.1-201ENST00000615844 593 ntBASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 IRF5P1-201ENST00000504852 2164 ntBASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SMIM28A0A1B0GU29 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 AC099654.3-201ENST00000447087 1546 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 RNU11-201ENST00000387069 134 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 Z97832.1-201ENST00000402490 328 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 AL137845.2-201ENST00000444292 988 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 RN7SL319P-201ENST00000480656 221 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 RN7SL591P-201ENST00000496150 292 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 USP9YP2-201ENST00000504503 1000 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 MRPS33P2-201ENST00000507850 322 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 BTF3P13-201ENST00000513224 490 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 USP9YP1-201ENST00000513521 1002 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 EIF4A2P5-201ENST00000529914 499 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms