Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TOMM20P1-201ENST00000534518 427 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 AL683826.1-201ENST00000624104 627 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 AC125238.2-201ENST00000430003 1440 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 TATDN2P3-201ENST00000452855 3665 ntBASIC8.77□□□□□ -1
PDZRN3Q9UPQ7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC8.77□□□□□ -1
PDZRN3Q9UPQ7 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC8.77□□□□□ -1
PDZRN3Q9UPQ7 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 BX284613.1-201ENST00000452221 1641 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 LARP1BP1-201ENST00000506036 1359 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 ASNSP6-201ENST00000592770 1618 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 MTND4P35-201ENST00000604257 1375 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 Y_RNA.132-201ENST00000363421 102 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 RNA5SP172-201ENST00000365061 118 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 SNORA70G-201ENST00000383923 142 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 SNORA7A-201ENST00000384765 139 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 RN7SKP106-201ENST00000410832 272 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 Z68694.1-201ENST00000413929 841 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 RPS10P18-201ENST00000442662 495 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 AC109486.1-201ENST00000486833 374 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 OR8I1P-201ENST00000529291 931 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 SETP17-201ENST00000534163 817 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 AC010198.2-201ENST00000550612 259 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 NDUFA5P11-201ENST00000567995 343 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 MIR3154-201ENST00000577829 84 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 AL355802.3-201ENST00000607571 545 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 AL357080.1-201ENST00000617394 239 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 MIR6861-201ENST00000618657 64 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 AC062029.1-202ENST00000606164 3651 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 AC091046.3-201ENST00000631455 1574 ntBASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC8.77□□□□□ -1.01
PDZRN3Q9UPQ7 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 MTCO1P11-201ENST00000429111 1528 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 RNA5SP308-201ENST00000362532 115 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 RNU6-1017P-201ENST00000363613 106 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 RNU6-481P-201ENST00000384194 107 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 RNU6-574P-201ENST00000384265 107 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 ERHP2-201ENST00000402323 299 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 RPL26P29-201ENST00000415623 438 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 RPS7P8-201ENST00000418311 581 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 AC233728.2-201ENST00000425348 757 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 TRGV7-201ENST00000427089 353 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 AC013410.1-201ENST00000436223 1232 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 RPL7P1-201ENST00000468161 747 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 RPL7P9-201ENST00000468715 747 ntBASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms