Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 SNORD56.6-201ENST00000384569 71 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AL121878.1-201ENST00000418638 859 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AC073465.2-201ENST00000440938 498 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 PSAT1P4-201ENST00000466500 526 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AC093270.2-201ENST00000486157 792 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AC021193.1-201ENST00000511607 420 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 NMNAT1P5-201ENST00000559657 841 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AC008833.1-201ENST00000611633 691 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AL121612.2-201ENST00000612261 482 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 RPSAP73-201ENST00000614820 330 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 MIR7155-201ENST00000615925 56 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AC037198.3-201ENST00000616754 526 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AC026367.3-201ENST00000619032 590 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 FRG1EP-201ENST00000634469 770 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AL603750.1-201ENST00000624216 1717 ntBASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.27□□□□□ -1.41
CLIP2Q9UDT6 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 AL359715.3-201ENST00000569267 2123 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 RNA5SP507-201ENST00000363603 121 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 MIR105-1-201ENST00000385222 81 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 MIR765-201ENST00000390226 114 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 DBIP1-201ENST00000401435 260 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 RPL23AP27-201ENST00000415161 451 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 AC104634.1-201ENST00000452720 462 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 AL389915.2-201ENST00000454576 441 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 SEPT7P3-201ENST00000455017 621 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 RPSAP50-201ENST00000481955 852 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 SNRPCP2-201ENST00000504370 475 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 RPS4XP20-201ENST00000505751 772 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 AC138409.2-202ENST00000507274 458 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 AC147055.3-201ENST00000510547 851 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 AC091912.1-201ENST00000511351 248 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 HMGN2P6-201ENST00000551091 273 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 ZNF733P-202ENST00000444809 1573 ntBASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.26□□□□□ -1.41
CLIP2Q9UDT6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 AC016769.2-201ENST00000414815 475 ntBASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 GNG5P5-201ENST00000420444 220 ntBASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 RPL7P40-201ENST00000481703 745 ntBASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 RN7SL423P-201ENST00000486202 304 ntBASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 AC004453.1-201ENST00000487895 408 ntBASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 NDUFA5P12-201ENST00000503796 343 ntBASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 SCARNA20.4-201ENST00000516969 131 ntBASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 AC022832.1-201ENST00000530718 645 ntBASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 RN7SL356P-201ENST00000582228 248 ntBASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms