Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC132825.1-201ENST00000463573 2247 ntBASIC6.27□□□□□ -1.41
COL20A1Q9P218 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL20A1Q9P218 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.27□□□□□ -1.41
COL20A1Q9P218 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL20A1Q9P218 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL20A1Q9P218 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
COL20A1Q9P218 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL20A1Q9P218 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL20A1Q9P218 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 TTC41P-205ENST00000551270 3963 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 RNU6-1257P-201ENST00000384625 110 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 AL133388.1-201ENST00000404509 287 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 RNF10P1-201ENST00000418589 369 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 AL606495.1-201ENST00000422100 813 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 AL139148.1-201ENST00000427122 680 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 BX679664.2-201ENST00000439282 283 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 EEF1B2P5-201ENST00000444820 548 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 RN7SL222P-201ENST00000476452 299 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC004815.1-201ENST00000484185 331 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 RN7SL30P-201ENST00000488416 306 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC072052.1-201ENST00000496556 306 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC004923.2-201ENST00000529649 369 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 OR11J2P-201ENST00000555298 907 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 MTND1P8-201ENST00000571424 950 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC068620.3-201ENST00000602749 560 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC109583.2-201ENST00000617367 129 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 AC144833.1-201ENST00000567953 4089 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 HSPD1P7-201ENST00000447985 1686 ntBASIC6.26□□□□□ -1.41
COL20A1Q9P218 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.26□□□□□ -1.41
COL20A1Q9P218 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL20A1Q9P218 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC010329.1-201ENST00000593903 8328 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL20A1Q9P218 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 TAF9BP2-201ENST00000400856 499 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 TATDN1P1-201ENST00000414123 891 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 SLC35E1P1-201ENST00000419313 864 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 AL133325.1-201ENST00000421090 382 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC007394.1-201ENST00000421941 531 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 AL645931.1-201ENST00000439737 410 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 RN7SL172P-201ENST00000460535 303 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC079841.1-201ENST00000481228 950 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC008410.1-201ENST00000483777 339 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 RPS21P4-201ENST00000487122 248 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 RN7SL205P-201ENST00000490174 284 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 SUMO1P1-201ENST00000497904 306 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms