Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 SNX6P1-201ENST00000601728 1224 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC090607.5-201ENST00000615692 224 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC037198.3-201ENST00000616754 526 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC118658.2-201ENST00000618697 459 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 RN7SKP28-201ENST00000364770 305 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 SNORA72.3-201ENST00000365074 132 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AP003170.5-201ENST00000397185 335 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 RPS17P17-201ENST00000419392 409 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 RPS27P18-201ENST00000431701 247 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 NDUFA5P10-201ENST00000432147 357 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AL645638.1-201ENST00000440519 361 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC069277.2-201ENST00000454211 432 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 RN7SL727P-201ENST00000482164 296 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC090638.1-201ENST00000498296 909 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 SUMO2P4-201ENST00000504193 276 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC024558.1-201ENST00000505008 528 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 BTG4P1-201ENST00000510421 183 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 RNU5A-7P-201ENST00000515979 116 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 CDC42P3-201ENST00000518493 633 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 HAUS8P1-201ENST00000549005 542 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC106730.2-201ENST00000566641 540 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 EIF1P5-201ENST00000585002 234 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 MIR4760-201ENST00000585040 80 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC008759.3-201ENST00000613300 508 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC132068.1-201ENST00000623805 459 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC136428.4-201ENST00000634254 1155 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 TMEM30CP-203ENST00000637814 1035 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 AL445984.1-201ENST00000637834 659 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB4Q8WW32 FBXL21-201ENST00000297158 1305 ntBASIC5.74□□□□□ -1.49
HMGB4Q8WW32 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AC130304.1-201ENST00000622942 2385 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 RNU4-2-201ENST00000365668 141 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 MIR223-201ENST00000385204 110 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 RPS6P23-201ENST00000413224 722 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 HMGA1P8-201ENST00000414130 321 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 BX664727.1-201ENST00000416024 466 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AL139148.1-201ENST00000427122 680 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 RPL7L1P9-201ENST00000431298 745 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 CYCSP6-201ENST00000434498 302 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms