Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 MTND5P12-201ENST00000502851 1449 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AC233968.1-201ENST00000611212 1300 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 RNA5SP187-201ENST00000384400 119 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 DHFRP5-201ENST00000406944 564 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 Z92846.1-201ENST00000456203 268 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 MTND6P32-201ENST00000457611 483 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 RPS21P4-201ENST00000487122 248 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 EIF3LP3-201ENST00000495197 822 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 HAUS1P1-201ENST00000505275 832 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 ATP5LP3-201ENST00000514223 304 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 RNU6-415P-201ENST00000516252 97 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AC012400.1-201ENST00000518452 381 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 MIR3176-201ENST00000582210 90 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 BNIP3P27-201ENST00000599991 412 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 RPSAP73-201ENST00000614820 330 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AC104307.1-201ENST00000616142 196 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AC109809.1-201ENST00000619665 545 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AC048344.4-201ENST00000619744 527 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 MIR6837-201ENST00000620884 64 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AC006927.4-201ENST00000639187 543 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 MIPEPP2-201ENST00000422560 1819 ntBASIC5.59□□□□□ -1.51
LMO3Q8TAP4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LMO3Q8TAP4 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LMO3Q8TAP4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LMO3Q8TAP4 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.59□□□□□ -1.52
LMO3Q8TAP4 AC004817.4-201ENST00000602396 3625 ntBASIC5.59□□□□□ -1.52
LMO3Q8TAP4 AP000473.2-201ENST00000602659 1537 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 PANDAR-201ENST00000629595 1506 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 AC004656.1-201ENST00000568479 4951 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 AC004158.1-201ENST00000564508 4319 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 MTND4P21-201ENST00000453886 1357 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 AL391361.1-201ENST00000405580 489 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 U3.32-201ENST00000408116 212 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 SNORA81-201ENST00000408493 178 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 MTND4P11-201ENST00000417020 1058 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 RPL17P35-201ENST00000432217 549 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 AC245047.2-201ENST00000441060 530 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 RAD1P2-201ENST00000446414 663 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 AC005412.2-201ENST00000492004 341 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 AL049874.2-201ENST00000492636 288 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 MYL12BP2-201ENST00000503948 512 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 AC106872.4-201ENST00000510050 523 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 BX510359.5-201ENST00000515651 304 ntBASIC5.58□□□□□ -1.52
LMO3Q8TAP4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.58□□□□□ -1.52
LMO3Q8TAP4 OR4R2P-201ENST00000530815 597 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms