Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RTL9Q8NET4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
RTL9Q8NET4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.4□□□□□ -1.38
RTL9Q8NET4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
RTL9Q8NET4 AC004656.1-201ENST00000568479 4951 ntBASIC6.4□□□□□ -1.38
RTL9Q8NET4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RTL9Q8NET4 MIR192-201ENST00000384915 110 ntBASIC6.4□□□□□ -1.39
RTL9Q8NET4 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RTL9Q8NET4 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.4□□□□□ -1.39
RTL9Q8NET4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.4□□□□□ -1.39
RTL9Q8NET4 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.4□□□□□ -1.39
RTL9Q8NET4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.4□□□□□ -1.39
RTL9Q8NET4 OR7E128P-201ENST00000532736 1024 ntBASIC6.4□□□□□ -1.39
RTL9Q8NET4 AC009117.1-201ENST00000563948 554 ntBASIC6.4□□□□□ -1.39
RTL9Q8NET4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.4□□□□□ -1.39
RTL9Q8NET4 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.4□□□□□ -1.39
RTL9Q8NET4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.4□□□□□ -1.39
RTL9Q8NET4 AC234771.5-201ENST00000600161 514 ntBASIC6.4□□□□□ -1.39
RTL9Q8NET4 AC011626.1-201ENST00000604710 562 ntBASIC6.4□□□□□ -1.39
RTL9Q8NET4 EIF3FP1-201ENST00000613970 806 ntBASIC6.4□□□□□ -1.39
RTL9Q8NET4 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.4□□□□□ -1.39
RTL9Q8NET4 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.4□□□□□ -1.39
RTL9Q8NET4 SAMMSON-210ENST00000641260 1308 ntBASIC6.4□□□□□ -1.39
RTL9Q8NET4 AC132825.1-201ENST00000463573 2247 ntBASIC6.4□□□□□ -1.39
RTL9Q8NET4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RTL9Q8NET4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.4□□□□□ -1.39
RTL9Q8NET4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.4□□□□□ -1.39
RTL9Q8NET4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.4□□□□□ -1.39
RTL9Q8NET4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.4□□□□□ -1.39
RTL9Q8NET4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
RTL9Q8NET4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
RTL9Q8NET4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RTL9Q8NET4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RTL9Q8NET4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RTL9Q8NET4 RN7SKP149-201ENST00000363008 344 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 RNA5SP428-201ENST00000365129 132 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 RNA5SP455-201ENST00000365190 119 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 RNU11-201ENST00000387069 134 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 AL133482.1-201ENST00000415988 498 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 AC245028.1-201ENST00000423259 256 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 AC090804.1-201ENST00000448870 490 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 TPT1P13-201ENST00000449760 499 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 RN7SL197P-201ENST00000466981 299 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 AC022133.1-201ENST00000490961 571 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 AC021006.3-201ENST00000530771 192 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 AC209154.1-201ENST00000582156 337 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 AL360012.1-201ENST00000602813 131 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 MIR6839-201ENST00000620425 113 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 AP000346.3-201ENST00000622821 210 ntBASIC6.39□□□□□ -1.39
RTL9Q8NET4 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RTL9Q8NET4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RTL9Q8NET4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
RTL9Q8NET4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.39□□□□□ -1.39
RTL9Q8NET4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RTL9Q8NET4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RTL9Q8NET4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
RTL9Q8NET4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.38□□□□□ -1.39
RTL9Q8NET4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RTL9Q8NET4 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RTL9Q8NET4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RTL9Q8NET4 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RTL9Q8NET4 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.38□□□□□ -1.39
RTL9Q8NET4 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RTL9Q8NET4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RTL9Q8NET4 RN7SKP145-201ENST00000363291 303 ntBASIC6.38□□□□□ -1.39
RTL9Q8NET4 GSTA7P-201ENST00000438425 448 ntBASIC6.38□□□□□ -1.39
RTL9Q8NET4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.38□□□□□ -1.39
RTL9Q8NET4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.38□□□□□ -1.39
RTL9Q8NET4 IMPA1P1-201ENST00000510718 842 ntBASIC6.38□□□□□ -1.39
RTL9Q8NET4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.38□□□□□ -1.39
RTL9Q8NET4 BTF3P13-201ENST00000513224 490 ntBASIC6.38□□□□□ -1.39
RTL9Q8NET4 RNA5SP43-201ENST00000516559 110 ntBASIC6.38□□□□□ -1.39
RTL9Q8NET4 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.38□□□□□ -1.39
RTL9Q8NET4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RTL9Q8NET4 MIR4697-201ENST00000582977 78 ntBASIC6.38□□□□□ -1.39
RTL9Q8NET4 AL031320.1-201ENST00000604177 357 ntBASIC6.38□□□□□ -1.39
RTL9Q8NET4 AC007786.3-201ENST00000615154 596 ntBASIC6.38□□□□□ -1.39
RTL9Q8NET4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RTL9Q8NET4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.38□□□□□ -1.39
RTL9Q8NET4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RTL9Q8NET4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RTL9Q8NET4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.38□□□□□ -1.39
RTL9Q8NET4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms