Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 AP000542.2-201ENST00000623199 6179 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 AC004817.4-201ENST00000602396 3625 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 AL034370.1-201ENST00000397254 1590 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 RNA5SP319-201ENST00000362768 119 ntBASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 AC064862.4-201ENST00000442180 334 ntBASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 RFPL4AP5-201ENST00000514977 504 ntBASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 RNU6-1334P-201ENST00000516032 105 ntBASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 AC008521.2-201ENST00000591021 259 ntBASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 AC023421.1-201ENST00000590535 1785 ntBASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 RNF19BPY-201ENST00000458209 1550 ntBASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC50Q8IVM0 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 SMG1P7-201ENST00000565246 2704 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 RNA5SP223-201ENST00000365174 120 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 MIR105-1-201ENST00000385222 81 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 AC005522.1-201ENST00000395416 346 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 OR2AH1P-201ENST00000425717 928 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 PRUNEP1-201ENST00000425846 705 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 YWHAEP1-201ENST00000453697 763 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 AL035090.1-201ENST00000454835 332 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 AC084754.1-201ENST00000463466 464 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 CBX1P5-201ENST00000475330 559 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 RN7SKP70-201ENST00000516655 271 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 AC027369.5-201ENST00000533838 755 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 AC005252.1-201ENST00000604518 1063 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 RN7SL787P-201ENST00000613000 284 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 MIR6778-201ENST00000617912 73 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 HCFC2P1-201ENST00000392864 1592 ntBASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC50Q8IVM0 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms