Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 FAM72A-208ENST00000607379 1139 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 uc_338.29-201ENST00000615099 168 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 MIR6721-201ENST00000617181 87 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 AL136228.1-201ENST00000622221 319 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 AC092159.4-201ENST00000624944 550 ntBASIC5.1□□□□□ -1.59
SHFQ7M4L6 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
SHFQ7M4L6 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHFQ7M4L6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHFQ7M4L6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHFQ7M4L6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHFQ7M4L6 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHFQ7M4L6 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHFQ7M4L6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHFQ7M4L6 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHFQ7M4L6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHFQ7M4L6 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHFQ7M4L6 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHFQ7M4L6 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 RN7SKP28-201ENST00000364770 305 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHFQ7M4L6 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHFQ7M4L6 RNU6-354P-201ENST00000383862 107 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 RNU6-610P-201ENST00000384264 107 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 SNORA51.9-201ENST00000384295 124 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 AL096711.1-201ENST00000404780 554 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 AL357752.1-201ENST00000412817 349 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 AL354890.1-201ENST00000413730 346 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 AL158825.1-201ENST00000414735 521 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 TMEM183AP1-205ENST00000432739 290 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 Z80107.1-201ENST00000436830 412 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 AC006994.1-201ENST00000438212 839 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 RPL7P33-201ENST00000444159 742 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 RPL5P13-201ENST00000462840 709 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 AC008379.1-201ENST00000463655 464 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 SYT14P1-201ENST00000481459 721 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 RN7SL423P-201ENST00000486202 304 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 SCARNA18.1-201ENST00000516330 83 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 TMEM97P2-201ENST00000517841 403 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 AC116917.1-201ENST00000520558 305 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 LSM3P2-201ENST00000551246 273 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 FAM106CP-201ENST00000582212 507 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 AC005479.3-201ENST00000602790 431 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 AL121652.1-201ENST00000608851 448 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 Z95327.3-201ENST00000610385 572 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 AC092266.1-201ENST00000610958 165 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 AC010632.3-201ENST00000611377 369 ntBASIC5.09□□□□□ -1.59
SHFQ7M4L6 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.09□□□□□ -1.59
SHFQ7M4L6 AC144833.1-201ENST00000567953 4089 ntBASIC5.09□□□□□ -1.6
SHFQ7M4L6 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.09□□□□□ -1.6
SHFQ7M4L6 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SHFQ7M4L6 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHFQ7M4L6 AC079298.1-201ENST00000625026 1619 ntBASIC5.08□□□□□ -1.6
SHFQ7M4L6 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHFQ7M4L6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.08□□□□□ -1.6
SHFQ7M4L6 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHFQ7M4L6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.08□□□□□ -1.6
SHFQ7M4L6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHFQ7M4L6 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.08□□□□□ -1.6
SHFQ7M4L6 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.08□□□□□ -1.6
SHFQ7M4L6 AC092376.2-201ENST00000622621 4116 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms