Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ZNF652P1-201ENST00000442420 1309 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
VARS2Q5ST30 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VARS2Q5ST30 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VARS2Q5ST30 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VARS2Q5ST30 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 RNU6-1013P-201ENST00000384180 107 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VARS2Q5ST30 TANK-203ENST00000402568 878 ntTSL 5 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 METTL15P3-201ENST00000415522 1221 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AL590609.2-201ENST00000421430 368 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AL953862.1-201ENST00000423016 168 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 AC083862.1-201ENST00000427378 1242 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 RBMY2QP-201ENST00000429799 1147 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AL353803.3-201ENST00000444641 335 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AC092421.1-201ENST00000448148 418 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AC005008.1-201ENST00000456151 612 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 CREM-226ENST00000469949 721 ntTSL 3 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 AC079944.1-201ENST00000485426 495 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AC108688.1-201ENST00000485817 713 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 DEFB109F-201ENST00000491870 277 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 HNRNPA1P44-201ENST00000503999 879 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AC097473.1-201ENST00000508142 408 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 Y_RNA.665-201ENST00000516177 98 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 RNU6-864P-201ENST00000516256 108 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 RNU6-1212P-201ENST00000517023 104 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 AP002373.2-201ENST00000541631 1060 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AC079598.4-201ENST00000549647 265 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 AP005119.1-201ENST00000580956 292 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AC069061.3-201ENST00000582254 823 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 RNU6-89P-201ENST00000606519 100 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 AC016405.2-201ENST00000607393 312 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 AC127459.3-201ENST00000624328 466 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 SDAD1P2-201ENST00000441308 2028 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VARS2Q5ST30 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
VARS2Q5ST30 AC108099.1-201ENST00000564402 3258 ntBASIC8.4□□□□□ -1.07
VARS2Q5ST30 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
VARS2Q5ST30 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
VARS2Q5ST30 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
VARS2Q5ST30 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
VARS2Q5ST30 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
VARS2Q5ST30 AC008937.3-201ENST00000606813 1700 ntBASIC8.4□□□□□ -1.07
VARS2Q5ST30 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
VARS2Q5ST30 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 AC127459.1-201ENST00000563129 2768 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 AL590004.4-201ENST00000566733 7060 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 AP004289.2-201ENST00000444413 1457 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 AC245060.6-201ENST00000624350 8420 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 Y_RNA.389-201ENST00000383924 113 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 Y_RNA.506-201ENST00000384494 102 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 MED15P9-201ENST00000424716 533 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 EIF1P2-201ENST00000428233 350 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 GAPDHP32-201ENST00000433816 998 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 AL022324.2-201ENST00000434827 780 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 AC231532.1-201ENST00000438584 312 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 RPS29P5-201ENST00000452777 171 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 AL451074.1-202ENST00000453762 989 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 TMEM248P1-201ENST00000510579 951 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms