Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3AP84243 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3AP84243 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
H3F3AP84243 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
H3F3AP84243 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3AP84243 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
H3F3AP84243 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
H3F3AP84243 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3AP84243 MIR105-1-201ENST00000385222 81 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 MIR589-201ENST00000385238 99 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3AP84243 CBX1P3-201ENST00000413296 527 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 RPL35AP24-201ENST00000413846 330 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3AP84243 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.7□□□□□ -1.66
H3F3AP84243 CLUHP1-201ENST00000435012 1190 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.7□□□□□ -1.66
H3F3AP84243 OR2AF1P-201ENST00000454899 889 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 RPS26P39-201ENST00000469206 341 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 UBA52P7-201ENST00000486088 380 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3AP84243 AC016559.2-201ENST00000510759 359 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
H3F3AP84243 OR4A46P-201ENST00000527255 933 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 AC027369.5-201ENST00000533838 755 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3AP84243 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3AP84243 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.7□□□□□ -1.66
H3F3AP84243 AC106730.2-201ENST00000566641 540 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3AP84243 RN7SL290P-201ENST00000578661 300 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 AP005262.1-201ENST00000582646 997 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
H3F3AP84243 AC095055.1-201ENST00000603472 1113 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 AC011626.1-201ENST00000604710 562 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 AP005131.7-201ENST00000610087 611 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 BNIP3P41-202ENST00000616656 861 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 CYP4F35P-202ENST00000636121 390 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
H3F3AP84243 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
H3F3AP84243 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
H3F3AP84243 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.7□□□□□ -1.66
H3F3AP84243 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.7□□□□□ -1.66
H3F3AP84243 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3AP84243 AC235565.1-201ENST00000456962 1325 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
H3F3AP84243 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.69□□□□□ -1.66
H3F3AP84243 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
H3F3AP84243 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
H3F3AP84243 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
H3F3AP84243 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
H3F3AP84243 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.69□□□□□ -1.66
H3F3AP84243 AL360270.2-201ENST00000562952 5985 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
H3F3AP84243 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.69□□□□□ -1.66
H3F3AP84243 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
H3F3AP84243 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
H3F3AP84243 RNA5SP90-201ENST00000364801 99 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 RNU1-74P-201ENST00000384108 171 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 OR8V1P-201ENST00000395193 873 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
H3F3AP84243 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.69□□□□□ -1.66
H3F3AP84243 RPS4XP16-201ENST00000427198 791 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 AC090018.1-201ENST00000434369 367 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 AL161722.2-201ENST00000434731 981 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 AC245047.2-201ENST00000441060 530 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 AL606490.1-201ENST00000452266 765 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 Z92846.1-201ENST00000456203 268 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.69□□□□□ -1.66
H3F3AP84243 RPS4XP1-201ENST00000482189 787 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 AC091544.1-201ENST00000484702 348 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 AC011411.1-201ENST00000509592 876 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.69□□□□□ -1.66
H3F3AP84243 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 AC134349.2-201ENST00000535136 910 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.69□□□□□ -1.66
H3F3AP84243 LSM3P2-201ENST00000551246 273 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 AC127381.1-201ENST00000555979 939 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.69□□□□□ -1.66
H3F3AP84243 MTCYBP13-201ENST00000578634 1093 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 MIR4472-2-201ENST00000582069 67 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.69□□□□□ -1.66
H3F3AP84243 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.69□□□□□ -1.66
H3F3AP84243 AC008115.4-201ENST00000619780 775 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.69□□□□□ -1.66
H3F3AP84243 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.69□□□□□ -1.66
H3F3AP84243 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.69□□□□□ -1.66
H3F3AP84243 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.69□□□□□ -1.66
H3F3AP84243 AC004808.2-201ENST00000627965 773 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.69□□□□□ -1.66
H3F3AP84243 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.69□□□□□ -1.66
H3F3AP84243 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.69□□□□□ -1.66
H3F3AP84243 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
H3F3AP84243 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
H3F3AP84243 PABPC1P6-201ENST00000445594 1829 ntBASIC4.69□□□□□ -1.66
H3F3AP84243 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
H3F3AP84243 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
H3F3AP84243 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
H3F3AP84243 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms