Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH12P55289 CYCSP38-201ENST00000559840 322 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AGGF1P7-201ENST00000562369 913 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC096996.1-201ENST00000563813 325 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC002310.3-201ENST00000569728 723 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH12P55289 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH12P55289 AC011492.1-201ENST00000600023 315 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC069431.2-201ENST00000604149 1099 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC073137.1-201ENST00000605636 634 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH12P55289 AL139124.1-201ENST00000609123 421 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AL359091.2-201ENST00000609303 556 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC010632.3-201ENST00000611377 369 ntBASIC5.23□□□□□ -1.57
CDH12P55289 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH12P55289 AC126544.2-201ENST00000625174 749 ntBASIC5.23□□□□□ -1.57
CDH12P55289 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH12P55289 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH12P55289 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH12P55289 AC013437.2-201ENST00000639587 677 ntBASIC5.23□□□□□ -1.57
CDH12P55289 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH12P55289 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH12P55289 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CDH12P55289 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH12P55289 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH12P55289 HSPD1P14-201ENST00000432666 1618 ntBASIC5.23□□□□□ -1.57
CDH12P55289 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH12P55289 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH12P55289 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH12P55289 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.23□□□□□ -1.57
CDH12P55289 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH12P55289 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH12P55289 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH12P55289 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH12P55289 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CDH12P55289 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH12P55289 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH12P55289 AC079097.1-201ENST00000512187 1399 ntBASIC5.22□□□□□ -1.57
CDH12P55289 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CDH12P55289 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH12P55289 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH12P55289 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH12P55289 RNA5SP500-201ENST00000364486 119 ntBASIC5.22□□□□□ -1.57
CDH12P55289 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH12P55289 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH12P55289 RNU6-796P-201ENST00000391086 107 ntBASIC5.22□□□□□ -1.57
CDH12P55289 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.22□□□□□ -1.57
CDH12P55289 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH12P55289 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH12P55289 TCEA1P2-201ENST00000420496 906 ntBASIC5.22□□□□□ -1.57
CDH12P55289 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH12P55289 FO393414.1-201ENST00000428697 1184 ntBASIC5.22□□□□□ -1.57
CDH12P55289 AC007679.3-201ENST00000434035 414 ntBASIC5.22□□□□□ -1.57
CDH12P55289 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH12P55289 PCBP2P1-201ENST00000437262 977 ntBASIC5.22□□□□□ -1.57
CDH12P55289 RPL7P33-201ENST00000444159 742 ntBASIC5.22□□□□□ -1.57
CDH12P55289 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH12P55289 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH12P55289 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH12P55289 AC118758.1-202ENST00000454719 225 ntBASIC5.22□□□□□ -1.57
CDH12P55289 NXT1P1-201ENST00000458481 316 ntBASIC5.22□□□□□ -1.57
CDH12P55289 snoU109.3-201ENST00000459477 145 ntBASIC5.22□□□□□ -1.57
CDH12P55289 AC092691.2-201ENST00000461787 803 ntBASIC5.22□□□□□ -1.57
CDH12P55289 AC008379.1-201ENST00000463655 464 ntBASIC5.22□□□□□ -1.57
CDH12P55289 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH12P55289 AC012123.2-201ENST00000485809 248 ntBASIC5.22□□□□□ -1.57
CDH12P55289 RPS26P24-201ENST00000497656 331 ntBASIC5.22□□□□□ -1.57
CDH12P55289 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH12P55289 LSM3P4-201ENST00000502948 309 ntBASIC5.22□□□□□ -1.57
CDH12P55289 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH12P55289 AC074255.1-201ENST00000511259 501 ntBASIC5.22□□□□□ -1.57
CDH12P55289 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH12P55289 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH12P55289 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH12P55289 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH12P55289 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH12P55289 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH12P55289 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH12P55289 AC023825.1-201ENST00000566704 1030 ntBASIC5.22□□□□□ -1.57
CDH12P55289 AC008507.2-201ENST00000588402 1176 ntBASIC5.22□□□□□ -1.57
CDH12P55289 BNIP3P38-201ENST00000601117 544 ntBASIC5.22□□□□□ -1.57
CDH12P55289 AC021851.1-201ENST00000608537 1082 ntBASIC5.22□□□□□ -1.57
CDH12P55289 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH12P55289 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CDH12P55289 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CDH12P55289 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH12P55289 AC018809.2-201ENST00000602436 3823 ntBASIC5.22□□□□□ -1.57
CDH12P55289 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH12P55289 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
CDH12P55289 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CDH12P55289 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CDH12P55289 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.21□□□□□ -1.57
CDH12P55289 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
CDH12P55289 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CDH12P55289 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.57
CDH12P55289 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH12P55289 NAMPTP1-201ENST00000440465 2514 ntBASIC5.21□□□□□ -1.58
CDH12P55289 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH12P55289 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CDH12P55289 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms